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  5. AMTR_s00023p00150580

AMTR_s00023p00150580 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00023.86

No description available


Gene families : OG0000139 (Archaeplastida) Phylogenetic Tree(s): OG0000139_tree ,
OG_05_0000052 (LandPlants) Phylogenetic Tree(s): OG_05_0000052_tree ,
OG_06_0000062 (SeedPlants) Phylogenetic Tree(s): OG_06_0000062_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00023p00150580
Cluster HCCA: Cluster_28

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01026858001 No alias No description available 0.02 Archaeplastida
LOC_Os11g34090.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_10434321g0020 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc10g079530.2.1 No alias UPF0481 protein At3g47200 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006071 glycerol metabolic process IEP Neighborhood
BP GO:0006400 tRNA modification IEP Neighborhood
BP GO:0006743 ubiquinone metabolic process IEP Neighborhood
BP GO:0006744 ubiquinone biosynthetic process IEP Neighborhood
MF GO:0008175 tRNA methyltransferase activity IEP Neighborhood
MF GO:0008176 tRNA (guanine-N7-)-methyltransferase activity IEP Neighborhood
MF GO:0008889 glycerophosphodiester phosphodiesterase activity IEP Neighborhood
MF GO:0016151 nickel cation binding IEP Neighborhood
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0019400 alditol metabolic process IEP Neighborhood
BP GO:0042180 cellular ketone metabolic process IEP Neighborhood
BP GO:0042181 ketone biosynthetic process IEP Neighborhood
BP GO:1901661 quinone metabolic process IEP Neighborhood
BP GO:1901663 quinone biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004158 DUF247_pln 21 130
No external refs found!