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  5. Solyc02g091960.4.1

Solyc02g091960.4.1


Description : CRWN nuclear lamina lamin-like protein


Gene families : OG0002164 (Archaeplastida) Phylogenetic Tree(s): OG0002164_tree ,
OG_05_0001522 (LandPlants) Phylogenetic Tree(s): OG_05_0001522_tree ,
OG_06_0001206 (SeedPlants) Phylogenetic Tree(s): OG_06_0001206_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g091960.4.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AT1G67230 LINC1 little nuclei1 0.06 Archaeplastida
AT1G68790 LINC3 little nuclei3 0.08 Archaeplastida
AT5G65770 LINC4 little nuclei4 0.09 Archaeplastida
AT5G65780 ATBCAT-5 branched-chain amino acid aminotransferase 5 /... 0.11 Archaeplastida
GSVIVT01031076001 No alias Cytoskeleton.cytoskeleton-nucleoskeleton linking.nuclear... 0.03 Archaeplastida
Gb_03736 No alias CRWN nuclear lamina lamin-like protein 0.02 Archaeplastida
LOC_Os01g56140.1 No alias CRWN nuclear lamina lamin-like protein 0.08 Archaeplastida
LOC_Os02g48010.1 No alias CRWN nuclear lamina lamin-like protein 0.11 Archaeplastida
Pp3c1_1360V3.1 No alias little nuclei1 0.03 Archaeplastida
Zm00001e019705_P002 No alias CRWN nuclear lamina lamin-like protein 0.1 Archaeplastida
Zm00001e023357_P001 No alias CRWN nuclear lamina lamin-like protein 0.12 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000149 SNARE binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006476 protein deacetylation IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016575 histone deacetylation IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
MF GO:0019905 syntaxin binding IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0035601 protein deacylation IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0098732 macromolecule deacylation IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!