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  5. Solyc02g092270.3.1

Solyc02g092270.3.1


Description : non-core component NduFS4 of NADH dehydrogenase


Gene families : OG0003772 (Archaeplastida) Phylogenetic Tree(s): OG0003772_tree ,
OG_05_0005829 (LandPlants) Phylogenetic Tree(s): OG_05_0005829_tree ,
OG_06_0007691 (SeedPlants) Phylogenetic Tree(s): OG_06_0007691_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g092270.3.1
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001229.17 No alias Cellular respiration.oxidative phosphorylation.NADH... 0.02 Archaeplastida
Cre03.g146247 No alias Cellular respiration.oxidative phosphorylation.NADH... 0.03 Archaeplastida
GSVIVT01002385001 No alias Cellular respiration.oxidative phosphorylation.NADH... 0.04 Archaeplastida
GSVIVT01004403001 No alias Cellular respiration.oxidative phosphorylation.NADH... 0.03 Archaeplastida
LOC_Os07g39710.1 No alias non-core component NduFS4 of NADH dehydrogenase 0.04 Archaeplastida
Mp8g15660.1 No alias non-core component NduFS4 of NADH dehydrogenase 0.03 Archaeplastida
Zm00001e010656_P001 No alias non-core component NduFS4 of NADH dehydrogenase 0.04 Archaeplastida
Zm00001e035398_P003 No alias non-core component NduFS4 of NADH dehydrogenase 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEA Interproscan
BP GO:0022900 electron transport chain IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP Neighborhood
CC GO:0000152 nuclear ubiquitin ligase complex IEP Neighborhood
MF GO:0004784 superoxide dismutase activity IEP Neighborhood
CC GO:0005680 anaphase-promoting complex IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
BP GO:0007088 regulation of mitotic nuclear division IEP Neighborhood
BP GO:0007346 regulation of mitotic cell cycle IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010038 response to metal ion IEP Neighborhood
BP GO:0010564 regulation of cell cycle process IEP Neighborhood
BP GO:0010965 regulation of mitotic sister chromatid separation IEP Neighborhood
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Neighborhood
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Neighborhood
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP Neighborhood
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP Neighborhood
BP GO:0033043 regulation of organelle organization IEP Neighborhood
BP GO:0033044 regulation of chromosome organization IEP Neighborhood
BP GO:0033045 regulation of sister chromatid segregation IEP Neighborhood
BP GO:0033047 regulation of mitotic sister chromatid segregation IEP Neighborhood
CC GO:0033176 proton-transporting V-type ATPase complex IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0051783 regulation of nuclear division IEP Neighborhood
BP GO:0051983 regulation of chromosome segregation IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
BP GO:0090231 regulation of spindle checkpoint IEP Neighborhood
BP GO:0090266 regulation of mitotic cell cycle spindle assembly checkpoint IEP Neighborhood
BP GO:1901976 regulation of cell cycle checkpoint IEP Neighborhood
BP GO:1901987 regulation of cell cycle phase transition IEP Neighborhood
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP Neighborhood
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP Neighborhood
BP GO:1903504 regulation of mitotic spindle checkpoint IEP Neighborhood
BP GO:1905818 regulation of chromosome separation IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR006885 NADH_UbQ_FeS_4_mit 55 149
No external refs found!