Solyc02g092970.3.1

Description : ARF-GTPase

Gene families : OG0000310 (Archaeplastida) Phylogenetic Tree(s): OG0000310_tree ,
OG_05_0000213 (LandPlants) Phylogenetic Tree(s): OG_05_0000213_tree ,
OG_06_0000536 (SeedPlants) Phylogenetic Tree(s): OG_06_0000536_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc02g092970.3.1
Cluster	HCCA: Cluster_122

Target	Alias	Description	ECC score	Gene Family Method
AT2G15310	ATARFB1A, ARFB1A	ADP-ribosylation factor B1A	0.04	Archaeplastida
GSVIVT01000224001	No alias	Vesicle trafficking.Coat protein I (COPI) coatomer...	0.06	Archaeplastida
Gb_01291	No alias	ARF-GTPase	0.02	Archaeplastida
Gb_14375	No alias	ARF-GTPase	0.03	Archaeplastida
MA_24477g0010	No alias	ARF-GTPase	0.02	Archaeplastida
Mp4g04230.1	No alias	ARF-GTPase	0.02	Archaeplastida
Pp3c10_25070V3.1	No alias	ADP-ribosylation factor A1F	0.05	Archaeplastida
Pp3c12_9900V3.1	No alias	ADP-ribosylation factor B1C	0.03	Archaeplastida
Pp3c18_16800V3.1	No alias	ADP-ribosylation factor A1B	0.02	Archaeplastida
Pp3c1_36390V3.1	No alias	ADP-ribosylation factor A1E	0.02	Archaeplastida
Pp3c4_20580V3.1	No alias	ADP-ribosylation factor A1E	0.03	Archaeplastida
Pp3c4_20623V3.1	No alias	ADP-ribosylation factor A1E	0.04	Archaeplastida
Zm00001e031984_P002	No alias	ARF-GTPase	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
BP	GO:0008150	biological_process	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	6	177

External Links

No external refs found!