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  5. Solyc02g093140.4.1

Solyc02g093140.4.1


Description : CBS domain-containing protein CBSX1, chloroplastic OS=Arabidopsis thaliana (sp|o23193|cbsx1_arath : 243.0)


Gene families : OG0002693 (Archaeplastida) Phylogenetic Tree(s): OG0002693_tree ,
OG_05_0003071 (LandPlants) Phylogenetic Tree(s): OG_05_0003071_tree ,
OG_06_0003816 (SeedPlants) Phylogenetic Tree(s): OG_06_0003816_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g093140.4.1
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00051p00045410 evm_27.TU.AmTr_v1... CBS domain-containing protein CBSX1, chloroplastic... 0.02 Archaeplastida
AT4G36910 CDCP2, LEJ2 Cystathionine beta-synthase (CBS) family protein 0.05 Archaeplastida
Gb_10406 No alias CBS domain-containing protein CBSX1, chloroplastic... 0.06 Archaeplastida
LOC_Os08g22149.1 No alias CBS domain-containing protein CBSX1, chloroplastic... 0.04 Archaeplastida
LOC_Os09g02710.1 No alias CBS domain-containing protein CBSX1, chloroplastic... 0.04 Archaeplastida
Zm00001e008668_P001 No alias CBS domain-containing protein CBSX2, chloroplastic... 0.05 Archaeplastida
Zm00001e022225_P004 No alias CBS domain-containing protein CBSX1, chloroplastic... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004721 phosphoprotein phosphatase activity IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0016311 dephosphorylation IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000644 CBS_dom 75 129
IPR000644 CBS_dom 169 222
No external refs found!