Description : 50S ribosomal protein L2, chloroplastic OS=Aethionema grandiflorum (sp|a4qjp0|rk2_aetgr : 109.0)
Gene families : OG0000693 (Archaeplastida) Phylogenetic Tree(s): OG0000693_tree ,
OG_05_0000458 (LandPlants) Phylogenetic Tree(s): OG_05_0000458_tree ,
OG_06_0085260 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc02g150102.1.1 | |
Cluster | HCCA: Cluster_189 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
ATCG00830 | RPL2.1 | ribosomal protein L2 | 0.04 | Archaeplastida | |
ATCG01310 | RPL2.2 | ribosomal protein L2 | 0.04 | Archaeplastida | |
Smo17971 | No alias | 50S ribosomal protein L2, chloroplastic OS=Huperzia lucidula | 0.03 | Archaeplastida | |
Solyc00g500152.1.1 | No alias | 50S ribosomal protein L2, chloroplastic OS=Nicotiana... | 0.05 | Archaeplastida | |
Solyc05g023730.1.1 | No alias | 50S ribosomal protein L2, chloroplastic OS=Nicotiana... | 0.08 | Archaeplastida | |
Solyc10g018610.2.1 | No alias | No annotation | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
CC | GO:0005840 | ribosome | IEA | Interproscan |
BP | GO:0006412 | translation | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003712 | transcription coregulator activity | IEP | Neighborhood |
MF | GO:0004356 | glutamate-ammonia ligase activity | IEP | Neighborhood |
BP | GO:0006357 | regulation of transcription by RNA polymerase II | IEP | Neighborhood |
BP | GO:0006631 | fatty acid metabolic process | IEP | Neighborhood |
MF | GO:0008061 | chitin binding | IEP | Neighborhood |
CC | GO:0009507 | chloroplast | IEP | Neighborhood |
CC | GO:0009536 | plastid | IEP | Neighborhood |
BP | GO:0009767 | photosynthetic electron transport chain | IEP | Neighborhood |
BP | GO:0009772 | photosynthetic electron transport in photosystem II | IEP | Neighborhood |
MF | GO:0016211 | ammonia ligase activity | IEP | Neighborhood |
CC | GO:0016592 | mediator complex | IEP | Neighborhood |
MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Neighborhood |
MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Neighborhood |
MF | GO:0016880 | acid-ammonia (or amide) ligase activity | IEP | Neighborhood |
BP | GO:0019684 | photosynthesis, light reaction | IEP | Neighborhood |
BP | GO:0022900 | electron transport chain | IEP | Neighborhood |
CC | GO:0044451 | nucleoplasm part | IEP | Neighborhood |
MF | GO:0045156 | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | IEP | Neighborhood |
MF | GO:0045300 | acyl-[acyl-carrier-protein] desaturase activity | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR022669 | Ribosomal_L2_C | 124 | 161 |
No external refs found! |