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  5. Solyc03g006220.4.1

Solyc03g006220.4.1


Description : Protein trichome birefringence-like 37 OS=Arabidopsis thaliana (sp|o22960|tbl37_arath : 183.0)


Gene families : OG0000059 (Archaeplastida) Phylogenetic Tree(s): OG0000059_tree ,
OG_05_0000413 (LandPlants) Phylogenetic Tree(s): OG_05_0000413_tree ,
OG_06_0000213 (SeedPlants) Phylogenetic Tree(s): OG_06_0000213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g006220.4.1
Cluster HCCA: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
AT1G73140 TBL31 Plant protein of unknown function (DUF828) 0.01 Archaeplastida
AT2G31110 TBL40 Plant protein of unknown function (DUF828) 0.06 Archaeplastida
AT2G40320 TBL33 TRICHOME BIREFRINGENCE-LIKE 33 0.03 Archaeplastida
AT3G55990 ESK1, TBL29 Plant protein of unknown function (DUF828) 0.01 Archaeplastida
AT5G01360 TBL3 Plant protein of unknown function (DUF828) 0.01 Archaeplastida
AT5G06700 TBR Plant protein of unknown function (DUF828) 0.02 Archaeplastida
GSVIVT01013788001 No alias Protein trichome birefringence-like 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01024714001 No alias Protein PMR5 OS=Arabidopsis thaliana 0.06 Archaeplastida
Gb_23718 No alias rhamnogalacturonan-I O-acetyltransferase (TBL) 0.02 Archaeplastida
LOC_Os01g46350.1 No alias Protein trichome birefringence-like 38 OS=Arabidopsis... 0.01 Archaeplastida
LOC_Os03g60300.1 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
LOC_Os03g60340.1 No alias xylan O-acetyltransferase (XOAT) 0.01 Archaeplastida
LOC_Os05g28630.1 No alias xylan O-acetyltransferase (XOAT) 0.03 Archaeplastida
LOC_Os07g49280.1 No alias xylan O-acetyltransferase (XOAT) 0.02 Archaeplastida
MA_10436441g0020 No alias xylan O-acetyltransferase (XOAT) 0.01 Archaeplastida
Solyc06g007170.4.1 No alias Protein PMR5 OS=Arabidopsis thaliana... 0.09 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR026057 PC-Esterase 90 139
IPR025846 PMR5_N_dom 37 89
No external refs found!