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  5. Solyc03g006670.4.1

Solyc03g006670.4.1


Description : cyclin (CYCD)


Gene families : OG0000252 (Archaeplastida) Phylogenetic Tree(s): OG0000252_tree ,
OG_05_0010948 (LandPlants) Phylogenetic Tree(s): OG_05_0010948_tree ,
OG_06_0010916 (SeedPlants) Phylogenetic Tree(s): OG_06_0010916_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g006670.4.1
Cluster HCCA: Cluster_203

Target Alias Description ECC score Gene Family Method Actions
AT1G70210 CYCD1;1, ATCYCD1;1 CYCLIN D1;1 0.03 Archaeplastida
AT3G50070 CYCD3;3 CYCLIN D3;3 0.04 Archaeplastida
GSVIVT01000451001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.04 Archaeplastida
Gb_34092 No alias cyclin (CYCD) 0.06 Archaeplastida
LOC_Os09g02360.1 No alias cyclin (CYCD) 0.02 Archaeplastida
LOC_Os09g21450.1 No alias cyclin (CYCD) 0.08 Archaeplastida
Mp8g17230.1 No alias cyclin (CYCD) 0.02 Archaeplastida
Pp3c15_17470V3.1 No alias CYCLIN D1;1 0.03 Archaeplastida
Zm00001e035215_P001 No alias cyclin (CYCD) 0.03 Archaeplastida
Zm00001e038767_P002 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 162 259
IPR006671 Cyclin_N 36 159
No external refs found!