Solyc03g007350.1.1

Description : Pentatricopeptide repeat-containing protein At2g13600 OS=Arabidopsis thaliana (sp|q9sit7|pp151_arath : 373.0)

Gene families : OG0018141 (Archaeplastida) Phylogenetic Tree(s): OG0018141_tree ,
OG_05_0015797 (LandPlants) Phylogenetic Tree(s): OG_05_0015797_tree ,
OG_06_0015533 (SeedPlants) Phylogenetic Tree(s): OG_06_0015533_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g007350.1.1
Cluster	HCCA: Cluster_75

Target	Alias	Description	ECC score	Gene Family Method	Actions
GSVIVT01028712001	No alias	Pentatricopeptide repeat-containing protein At2g13600...	0.05	Archaeplastida
Zm00001e040682_P001	No alias	no hits & (original description: none)	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0008270	zinc ion binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	386	412
IPR002885	Pentatricopeptide_repeat	57	85
IPR002885	Pentatricopeptide_repeat	87	115
IPR002885	Pentatricopeptide_repeat	219	247
IPR002885	Pentatricopeptide_repeat	325	348
IPR002885	Pentatricopeptide_repeat	190	217
IPR002885	Pentatricopeptide_repeat	353	381
IPR002885	Pentatricopeptide_repeat	588	612
IPR002885	Pentatricopeptide_repeat	513	560
IPR002885	Pentatricopeptide_repeat	413	459

External Links

No external refs found!