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  5. Solyc03g007680.3.1

Solyc03g007680.3.1


Description : component BET5 of TRAPP-I/II/III complex-shared components


Gene families : OG0006658 (Archaeplastida) Phylogenetic Tree(s): OG0006658_tree ,
OG_05_0007074 (LandPlants) Phylogenetic Tree(s): OG_05_0007074_tree ,
OG_06_0007507 (SeedPlants) Phylogenetic Tree(s): OG_06_0007507_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g007680.3.1
Cluster HCCA: Cluster_266

Target Alias Description ECC score Gene Family Method Actions
AT1G51160 No alias SNARE-like superfamily protein 0.03 Archaeplastida
Cre06.g289700 No alias Vesicle trafficking.target membrane tethering.TRAPP... 0.03 Archaeplastida
LOC_Os01g33020.1 No alias component BET5 of TRAPP-I/II/III complex-shared components 0.04 Archaeplastida
Mp6g01450.1 No alias component BET5 of TRAPP-I/II/III complex-shared components 0.02 Archaeplastida
Pp3c12_8100V3.1 No alias SNARE-like superfamily protein 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0016192 vesicle-mediated transport IEA Interproscan
CC GO:0030008 TRAPP complex IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to ER IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
InterPro domains Description Start Stop
IPR007233 TRAPPC 24 153
No external refs found!