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  5. AMTR_s00023p00217880

AMTR_s00023p00217880 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00023.161

Description : GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana


Gene families : OG0000147 (Archaeplastida) Phylogenetic Tree(s): OG0000147_tree ,
OG_05_0000060 (LandPlants) Phylogenetic Tree(s): OG_05_0000060_tree ,
OG_06_0000061 (SeedPlants) Phylogenetic Tree(s): OG_06_0000061_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00023p00217880
Cluster HCCA: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00212280 evm_27.TU.AmTr_v1... GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G28580 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.03 Archaeplastida
AT1G28660 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.04 Archaeplastida
AT1G28670 ARAB-1 GDSL-like Lipase/Acylhydrolase superfamily protein 0.05 Archaeplastida
AT2G27360 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.05 Archaeplastida
GSVIVT01020673001 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01031083001 No alias Protein degradation.peptidase families.aspartic-type... 0.04 Archaeplastida
Gb_09270 No alias GDSL esterase/lipase At1g28650 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Gb_16009 No alias GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_16975 No alias GDSL esterase/lipase At1g28650 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g11650.1 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g11710.1 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g11750.1 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os01g12320.1 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os01g12381.1 No alias GDSL esterase/lipase At1g31550 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g46120.1 No alias GDSL esterase/lipase At2g27360 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g46169.1 No alias GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g62740.1 No alias GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os05g11970.1 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os06g06250.2 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os07g44780.1 No alias GDSL esterase/lipase At1g28600 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10390582g0010 No alias GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_190687g0010 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_76943g0010 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Pp3c17_3620V3.1 No alias GDSL-like Lipase/Acylhydrolase superfamily protein 0.02 Archaeplastida
Smo83754 No alias GDSL esterase/lipase At4g01130 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc01g099010.3.1 No alias Acetylajmalan esterase OS=Rauvolfia serpentina... 0.03 Archaeplastida
Solyc01g099040.4.1 No alias Acetylajmalan esterase OS=Rauvolfia serpentina... 0.03 Archaeplastida
Solyc01g099050.3.1 No alias GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc08g006487.1.1 No alias Acetylajmalan esterase OS=Rauvolfia serpentina... 0.03 Archaeplastida
Solyc10g008710.3.1 No alias GDSL esterase/lipase At1g28610 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc12g096620.1.1 No alias GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e006337_P001 No alias GDSL esterase/lipase At3g48460 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Zm00001e011116_P002 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e014225_P001 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e014296_P001 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e026047_P001 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e026048_P001 No alias GDSL esterase/lipase At1g28590 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e027180_P002 No alias GDSL esterase/lipase At5g45910 OS=Arabidopsis thaliana... 0.05 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0016788 hydrolase activity, acting on ester bonds IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0003855 3-dehydroquinate dehydratase activity IEP Neighborhood
MF GO:0004512 inositol-3-phosphate synthase activity IEP Neighborhood
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006021 inositol biosynthetic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0030674 protein binding, bridging IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0046165 alcohol biosynthetic process IEP Neighborhood
BP GO:0046173 polyol biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0051015 actin filament binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
MF GO:0060090 molecular adaptor activity IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001087 GDSL 31 357
No external refs found!