1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g031650.4.1

Solyc03g031650.4.1


Description : ATG8 autophagosome ubiquitin-fold protein


Gene families : OG0000927 (Archaeplastida) Phylogenetic Tree(s): OG0000927_tree ,
OG_05_0107960 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0085715 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g031650.4.1
Cluster HCCA: Cluster_258

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00225880 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.ATG8/ATG12... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
InterPro domains Description Start Stop
IPR004241 Atg8-like 14 117
No external refs found!