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  5. Solyc03g032060.1.1

Solyc03g032060.1.1


Description : RING-H2 finger protein ATL80 OS=Arabidopsis thaliana (sp|q9lm69|atl80_arath : 120.0)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0002315 (SeedPlants) Phylogenetic Tree(s): OG_06_0002315_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g032060.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00140p00098680 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
AT1G76410 ATL8 RING/U-box superfamily protein 0.08 Archaeplastida
AT2G37580 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT4G30370 No alias RING/U-box superfamily protein 0.08 Archaeplastida
GSVIVT01022306001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
LOC_Os01g11480.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os01g11500.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
LOC_Os01g60730.2 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g15110.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g45390.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os05g40020.1 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os07g23970.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g39770.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.01 Archaeplastida
LOC_Os10g39936.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10244600g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Smo412606 No alias Protein degradation.peptide tagging.Ubiquitin... 0.07 Archaeplastida
Solyc03g033330.3.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Solyc03g123680.1.1 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Solyc12g005020.2.1 No alias RING-H2-class E3 ligase 0.08 Archaeplastida
Zm00001e003426_P001 No alias ubiquitin protein ligase (XERICO) 0.03 Archaeplastida
Zm00001e016474_P001 No alias RING-H2-class E3 ligase 0.01 Archaeplastida
Zm00001e037107_P001 No alias RING-H2-class E3 ligase 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 102 145
No external refs found!