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  5. Solyc03g033410.4.1

Solyc03g033410.4.1


Description : conjugation E2 protein


Gene families : OG0000275 (Archaeplastida) Phylogenetic Tree(s): OG0000275_tree ,
OG_05_0000172 (LandPlants) Phylogenetic Tree(s): OG_05_0000172_tree ,
OG_06_0000190 (SeedPlants) Phylogenetic Tree(s): OG_06_0000190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g033410.4.1
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT2G16740 UBC29 ubiquitin-conjugating enzyme 29 0.1 Archaeplastida
AT3G08700 UBC12 ubiquitin-conjugating enzyme 12 0.03 Archaeplastida
GSVIVT01024027001 No alias Protein degradation.peptide... 0.09 Archaeplastida
LOC_Os02g02830.1 No alias conjugation E2 protein 0.05 Archaeplastida
Mp5g21800.1 No alias conjugation E2 protein 0.02 Archaeplastida
Pp3c14_23460V3.1 No alias ubiquitin-conjugating enzyme 10 0.03 Archaeplastida
Pp3c24_130V3.1 No alias Ubiquitin-conjugating enzyme family protein 0.02 Archaeplastida
Zm00001e009636_P001 No alias conjugation E2 protein 0.04 Archaeplastida
Zm00001e025244_P002 No alias conjugation E2 protein 0.04 Archaeplastida
Zm00001e033719_P001 No alias conjugation E2 protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0015858 nucleoside transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
BP GO:1901642 nucleoside transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!