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  5. Solyc03g033660.4.1

Solyc03g033660.4.1


Description : transcription factor (GATA)


Gene families : OG0000094 (Archaeplastida) Phylogenetic Tree(s): OG0000094_tree ,
OG_05_0000055 (LandPlants) Phylogenetic Tree(s): OG_05_0000055_tree ,
OG_06_0000244 (SeedPlants) Phylogenetic Tree(s): OG_06_0000244_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g033660.4.1
Cluster HCCA: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00056p00080350 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AMTR_s00057p00121410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
AT2G18380 GATA20 GATA transcription factor 20 0.05 Archaeplastida
AT3G20750 GATA29 GATA transcription factor 29 0.03 Archaeplastida
AT3G50870 HAN, MNP, GATA18 GATA type zinc finger transcription factor family protein 0.03 Archaeplastida
AT3G54810 BME3-ZF, BME3, GATA8 Plant-specific GATA-type zinc finger transcription... 0.02 Archaeplastida
AT3G60530 GATA4 GATA transcription factor 4 0.05 Archaeplastida
AT4G16141 No alias GATA type zinc finger transcription factor family protein 0.03 Archaeplastida
AT5G26930 GATA23 GATA transcription factor 23 0.03 Archaeplastida
Cpa|evm.model.tig00001094.21 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
Cre01.g025050 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
Cre06.g266850 No alias No description available 0.03 Archaeplastida
GSVIVT01015204001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01018951001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.16 Archaeplastida
GSVIVT01033385001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
LOC_Os01g54210.1 No alias transcription factor (GATA) 0.02 Archaeplastida
LOC_Os02g12790.1 No alias transcription factor (GATA) 0.03 Archaeplastida
LOC_Os02g43150.1 No alias transcription factor (GATA) 0.04 Archaeplastida
LOC_Os02g56250.1 No alias transcription factor (GATA) 0.03 Archaeplastida
LOC_Os04g45650.2 No alias transcription factor (GATA) 0.04 Archaeplastida
LOC_Os05g50270.1 No alias transcription factor (GATA) 0.11 Archaeplastida
LOC_Os06g37450.1 No alias transcription factor (GATA) 0.06 Archaeplastida
LOC_Os10g40810.1 No alias transcription factor (GATA) 0.04 Archaeplastida
LOC_Os12g42970.1 No alias transcription factor (GATA) 0.02 Archaeplastida
MA_10434815g0010 No alias transcription factor (GATA) 0.04 Archaeplastida
MA_92522g0010 No alias transcription factor (GATA) 0.04 Archaeplastida
Smo69510 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
Solyc05g053500.4.1 No alias transcription factor (GATA) 0.03 Archaeplastida
Zm00001e015260_P001 No alias transcription factor (GATA) 0.07 Archaeplastida
Zm00001e018438_P001 No alias transcription factor (GATA) 0.02 Archaeplastida
Zm00001e020243_P001 No alias transcription factor (GATA) 0.02 Archaeplastida
Zm00001e026601_P001 No alias transcription factor (GATA) 0.07 Archaeplastida
Zm00001e028245_P001 No alias transcription factor (GATA) 0.03 Archaeplastida
Zm00001e032513_P001 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e037876_P002 No alias transcription factor (GATA) 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
MF GO:0008374 O-acyltransferase activity IEP Neighborhood
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
BP GO:0045017 glycerolipid biosynthetic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000679 Znf_GATA 214 248
No external refs found!