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  5. Solyc03g034130.4.1

Solyc03g034130.4.1


Description : transcription factor (HD-ZIP I/II)


Gene families : OG0000146 (Archaeplastida) Phylogenetic Tree(s): OG0000146_tree ,
OG_05_0000061 (LandPlants) Phylogenetic Tree(s): OG_05_0000061_tree ,
OG_06_0003020 (SeedPlants) Phylogenetic Tree(s): OG_06_0003020_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g034130.4.1
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00267430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
AMTR_s00040p00235500 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
AT3G61890 HB-12, ATHB-12, ATHB12 homeobox 12 0.03 Archaeplastida
AT5G03790 HB51, ATHB51, LMI1 homeobox 51 0.03 Archaeplastida
AT5G53980 ATHB52, HB52 homeobox protein 52 0.02 Archaeplastida
Gb_07209 No alias Homeobox-leucine zipper protein HAT7 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os02g43330.1 No alias transcription factor (HD-ZIP I/II) 0.02 Archaeplastida
LOC_Os04g45810.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os08g32080.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os08g32085.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
LOC_Os09g21180.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
LOC_Os09g35910.1 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
MA_12053g0010 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
MA_128g0010 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
MA_132936g0010 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Pp3c7_2100V3.1 No alias Homeobox-leucine zipper protein family 0.02 Archaeplastida
Solyc01g010600.4.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Zm00001e002803_P001 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
Zm00001e010218_P001 No alias transcription factor (HD-ZIP I/II) 0.06 Archaeplastida
Zm00001e015717_P003 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004521 endoribonuclease activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0033897 ribonuclease T2 activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 61 116
No external refs found!