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  5. Solyc03g034260.1.1

Solyc03g034260.1.1


Description : transcription factor (MADS/AGL)


Gene families : OG0007582 (Archaeplastida) Phylogenetic Tree(s): OG0007582_tree ,
OG_05_0005641 (LandPlants) Phylogenetic Tree(s): OG_05_0005641_tree ,
OG_06_0003653 (SeedPlants) Phylogenetic Tree(s): OG_06_0003653_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g034260.1.1
Cluster HCCA: Cluster_446

Target Alias Description ECC score Gene Family Method Actions
Solyc03g033890.1.1 No alias transcription factor (MADS/AGL) 0.06 Archaeplastida
Solyc03g033900.1.1 No alias transcription factor (MADS/AGL) 0.08 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0004518 nuclease activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004866 endopeptidase inhibitor activity IEP Neighborhood
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
BP GO:0009611 response to wounding IEP Neighborhood
MF GO:0030414 peptidase inhibitor activity IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0061134 peptidase regulator activity IEP Neighborhood
MF GO:0061135 endopeptidase regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 16 63
No external refs found!