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  5. AMTR_s00023p00241850

AMTR_s00023p00241850 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00023.208

No description available


Gene families : OG0001212 (Archaeplastida) Phylogenetic Tree(s): OG0001212_tree ,
OG_05_0000743 (LandPlants) Phylogenetic Tree(s): OG_05_0000743_tree ,
OG_06_0000370 (SeedPlants) Phylogenetic Tree(s): OG_06_0000370_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00023p00241850
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00234960 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00039p00100150 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!