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  4. Sequence
  5. Solyc03g059270.4.1

Solyc03g059270.4.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000935 (Archaeplastida) Phylogenetic Tree(s): OG0000935_tree ,
OG_05_0000679 (LandPlants) Phylogenetic Tree(s): OG_05_0000679_tree ,
OG_06_0085825 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g059270.4.1
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00243980 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.07 Archaeplastida
AMTR_s00093p00164790 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01009046001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01025301001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
GSVIVT01033329001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
Gb_21793 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os01g63980.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os05g37190.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os06g40960.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os09g13680.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Pp3c9_22230V3.1 No alias C2H2-type zinc finger family protein 0.03 Archaeplastida
Smo36987 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.03 Archaeplastida
Solyc06g074360.4.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e031762_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Neighborhood
BP GO:0001932 regulation of protein phosphorylation IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005337 nucleoside transmembrane transporter activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0015858 nucleoside transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
MF GO:0019900 kinase binding IEP Neighborhood
MF GO:0019901 protein kinase binding IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0042325 regulation of phosphorylation IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0043549 regulation of kinase activity IEP Neighborhood
BP GO:0045859 regulation of protein kinase activity IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051338 regulation of transferase activity IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
BP GO:1901642 nucleoside transmembrane transport IEP Neighborhood
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!