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  5. Solyc03g064020.3.1

Solyc03g064020.3.1


Description : A-class RAB GTPase


Gene families : OG0000173 (Archaeplastida) Phylogenetic Tree(s): OG0000173_tree ,
OG_05_0001287 (LandPlants) Phylogenetic Tree(s): OG_05_0001287_tree ,
OG_06_0001319 (SeedPlants) Phylogenetic Tree(s): OG_06_0001319_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g064020.3.1
Cluster HCCA: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
AT1G07410 RABA2b,... RAB GTPase homolog A2B 0.03 Archaeplastida
AT5G65270 AtRABA4a, RABA4a RAB GTPase homolog A4A 0.04 Archaeplastida
Cre03.g189250 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 Archaeplastida
Zm00001e000673_P001 No alias A-class RAB GTPase 0.03 Archaeplastida
Zm00001e009700_P001 No alias A-class RAB GTPase 0.04 Archaeplastida
Zm00001e028750_P001 No alias A-class RAB GTPase 0.03 Archaeplastida
Zm00001e037250_P001 No alias A-class RAB GTPase 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001806 Small_GTPase 17 177
No external refs found!