1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g079960.4.1

Solyc03g079960.4.1


Description : no description available(sp|q9ff29|pr5k_arath : 239.0)


Gene families : OG0000084 (Archaeplastida) Phylogenetic Tree(s): OG0000084_tree ,
OG_05_0000144 (LandPlants) Phylogenetic Tree(s): OG_05_0000144_tree ,
OG_06_0000099 (SeedPlants) Phylogenetic Tree(s): OG_06_0000099_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g079960.4.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00239680 evm_27.TU.AmTr_v1... Thaumatin-like protein OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00017p00203890 evm_27.TU.AmTr_v1... Thaumatin-like protein OS=Arabidopsis thaliana 0.03 Archaeplastida
AT1G77700 No alias Pathogenesis-related thaumatin superfamily protein 0.19 Archaeplastida
AT4G11650 ATOSM34, OSM34 osmotin 34 0.04 Archaeplastida
AT4G24180 TLP1, ATTLP1 THAUMATIN-LIKE PROTEIN 1 0.04 Archaeplastida
AT4G38660 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Archaeplastida
AT5G40020 No alias Pathogenesis-related thaumatin superfamily protein 0.03 Archaeplastida
GSVIVT01008918001 No alias Thaumatin-like protein OS=Arabidopsis thaliana 0.2 Archaeplastida
GSVIVT01018769001 No alias Thaumatin-like protein 1 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01033694001 No alias Thaumatin-like protein 1 OS=Pyrus pyrifolia 0.03 Archaeplastida
GSVIVT01038679001 No alias Thaumatin-like protein 1 OS=Arabidopsis thaliana 0.22 Archaeplastida
Gb_07674 No alias no description available(sp|q5dwg2|crj34_cryja : 356.0) 0.03 Archaeplastida
Gb_19743 No alias no description available(sp|a4pbq1|crj38_cryja : 302.0) 0.02 Archaeplastida
Gb_37208 No alias Thaumatin-like protein OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os04g59370.1 No alias no description available(sp|q5dwg1|crj35_cryja : 238.0) 0.07 Archaeplastida
LOC_Os06g47600.1 No alias Thaumatin-like protein OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os07g23470.1 No alias no description available(sp|q9ff29|pr5k_arath : 192.0) 0.02 Archaeplastida
LOC_Os07g23730.1 No alias no description available(sp|q9ff29|pr5k_arath : 206.0) 0.04 Archaeplastida
LOC_Os09g32280.1 No alias Thaumatin-like protein 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os09g36580.1 No alias Thaumatin-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os10g27280.1 No alias Thaumatin-like protein OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os11g47944.1 No alias Thaumatin-like protein OS=Oryza sativa subsp. japonica... 0.06 Archaeplastida
MA_10211971g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10216549g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10432704g0010 No alias no description available(sp|q5dwg1|crj35_cryja : 237.0) 0.07 Archaeplastida
MA_10433421g0010 No alias no description available(sp|q5dwg1|crj35_cryja : 200.0) 0.03 Archaeplastida
MA_10433458g0020 No alias no description available(sp|q5dwg2|crj34_cryja : 183.0) 0.04 Archaeplastida
MA_133779g0010 No alias no description available(sp|q5dwg2|crj34_cryja : 240.0) 0.03 Archaeplastida
MA_4320679g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_4837797g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_5972053g0010 No alias Thaumatin-like protein OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_942533g0010 No alias Osmotin-like protein OS=Solanum lycopersicum... 0.03 Archaeplastida
Mp1g15130.1 No alias Pathogenesis-related protein 5 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc03g118780.3.1 No alias Thaumatin-like protein OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc04g081560.3.1 No alias Thaumatin-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc08g080620.1.1 No alias Osmotin-like protein OSML13 OS=Solanum commersonii... 0.04 Archaeplastida
Solyc08g080670.1.1 No alias Osmotin-like protein OSML15 OS=Solanum commersonii... 0.04 Archaeplastida
Zm00001e002643_P001 No alias no description available(sp|q9ff29|pr5k_arath : 266.0) 0.02 Archaeplastida
Zm00001e004789_P001 No alias Thaumatin-like protein OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e005203_P001 No alias Zeamatin OS=Zea mays (sp|p33679|zeam_maize : 270.0) 0.02 Archaeplastida
Zm00001e010095_P001 No alias Thaumatin-like protein 1 OS=Arabidopsis thaliana... 0.19 Archaeplastida
Zm00001e020930_P001 No alias Thaumatin-like protein OS=Oryza sativa subsp. japonica... 0.1 Archaeplastida
Zm00001e033094_P001 No alias Pathogenesis-related protein 5 OS=Arabidopsis thaliana... 0.16 Archaeplastida
Zm00001e038595_P001 No alias Thaumatin-like protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR001938 Thaumatin 32 247
No external refs found!