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  5. Solyc03g081210.1.1

Solyc03g081210.1.1


Description : Protein TRANSPARENT TESTA GLABRA 1 OS=Arabidopsis thaliana (sp|q9xgn1|ttg1_arath : 443.0)


Gene families : OG0001679 (Archaeplastida) Phylogenetic Tree(s): OG0001679_tree ,
OG_05_0001586 (LandPlants) Phylogenetic Tree(s): OG_05_0001586_tree ,
OG_06_0001588 (SeedPlants) Phylogenetic Tree(s): OG_06_0001588_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g081210.1.1
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01033890001 No alias WD repeat-containing protein LWD1 OS=Arabidopsis thaliana 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 260 293
IPR001680 WD40_repeat 174 204
No external refs found!