Solyc03g082435.1.1

Description : transcription factor (FAR1)

Gene families : OG0000638 (Archaeplastida) Phylogenetic Tree(s): OG0000638_tree ,
OG_05_0000359 (LandPlants) Phylogenetic Tree(s): OG_05_0000359_tree ,
OG_06_0001378 (SeedPlants) Phylogenetic Tree(s): OG_06_0001378_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g082435.1.1
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
Solyc01g016665.1.1	No alias	transcription factor (FAR1)	0.02	Archaeplastida
Solyc01g018040.1.1	No alias	transcription factor (FAR1)	0.02	Archaeplastida
Solyc03g113110.1.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Solyc05g009587.1.1	No alias	transcription factor (FAR1)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004523	RNA-DNA hybrid ribonuclease activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR007527	Znf_SWIM	522	557
IPR018289	MULE_transposase_dom	241	335
IPR004330	FAR1_DNA_bnd_dom	33	119

External Links

No external refs found!