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  5. Solyc03g093230.4.1

Solyc03g093230.4.1


Description : tonoplast intrinsic protein (TIP)


Gene families : OG0000026 (Archaeplastida) Phylogenetic Tree(s): OG0000026_tree ,
OG_05_0000266 (LandPlants) Phylogenetic Tree(s): OG_05_0000266_tree ,
OG_06_0002082 (SeedPlants) Phylogenetic Tree(s): OG_06_0002082_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g093230.4.1
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00145780 evm_27.TU.AmTr_v1... Solute transport.channels.MIP family.tonoplast intrinsic... 0.02 Archaeplastida
AT2G25810 TIP4;1 tonoplast intrinsic protein 4;1 0.03 Archaeplastida
AT3G47440 TIP5;1 tonoplast intrinsic protein 5;1 0.03 Archaeplastida
GSVIVT01016276001 No alias Solute transport.channels.MIP family.plasma membrane... 0.02 Archaeplastida
GSVIVT01030857001 No alias Solute transport.channels.MIP family.Nodulin-26-like... 0.03 Archaeplastida
LOC_Os02g51110.1 No alias Nodulin-26-like intrinsic protein (NIP) 0.02 Archaeplastida
LOC_Os04g16450.1 No alias plasma membrane intrinsic protein (PIP) 0.02 Archaeplastida
LOC_Os07g26690.1 No alias plasma membrane intrinsic protein (PIP) 0.03 Archaeplastida
LOC_Os09g36930.1 No alias plasma membrane intrinsic protein (PIP) 0.02 Archaeplastida
MA_10426681g0010 No alias plasma membrane intrinsic protein (PIP) 0.02 Archaeplastida
MA_10426909g0010 No alias Aquaporin PIP2-7 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_6484736g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_68132g0010 No alias plasma membrane intrinsic protein (PIP) 0.03 Archaeplastida
Pp3c13_18810V3.1 No alias plasma membrane intrinsic protein 1B 0.02 Archaeplastida
Pp3c15_12660V3.1 No alias NOD26-like intrinsic protein 5;1 0.03 Archaeplastida
Pp3c8_18348V3.1 No alias beta-tonoplast intrinsic protein 0.02 Archaeplastida
Pp3c8_18350V3.1 No alias tonoplast intrinsic protein 2;3 0.02 Archaeplastida
Zm00001e004496_P002 No alias tonoplast intrinsic protein (TIP) 0.03 Archaeplastida
Zm00001e007523_P001 No alias tonoplast intrinsic protein (TIP) 0.03 Archaeplastida
Zm00001e007564_P001 No alias plasma membrane intrinsic protein (PIP) 0.02 Archaeplastida
Zm00001e023039_P001 No alias plasma membrane intrinsic protein (PIP) 0.03 Archaeplastida
Zm00001e039086_P002 No alias tonoplast intrinsic protein (TIP) 0.02 Archaeplastida
Zm00001e041530_P001 No alias tonoplast intrinsic protein (TIP) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004529 exodeoxyribonuclease activity IEP Neighborhood
MF GO:0004536 deoxyribonuclease activity IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
MF GO:0008297 single-stranded DNA exodeoxyribonuclease activity IEP Neighborhood
MF GO:0008409 5'-3' exonuclease activity IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016796 exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Neighborhood
MF GO:0016895 exodeoxyribonuclease activity, producing 5'-phosphomonoesters IEP Neighborhood
CC GO:0030119 AP-type membrane coat adaptor complex IEP Neighborhood
CC GO:0030131 clathrin adaptor complex IEP Neighborhood
MF GO:0035312 5'-3' exodeoxyribonuclease activity IEP Neighborhood
MF GO:0045145 single-stranded DNA 5'-3' exodeoxyribonuclease activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000425 MIP 13 228
No external refs found!