1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g098050.3.1

Solyc03g098050.3.1


Description : Calmodulin OS=Solanum lycopersicum (sp|p27161|calm_sollc : 234.0)


Gene families : OG0000031 (Archaeplastida) Phylogenetic Tree(s): OG0000031_tree ,
OG_05_0000412 (LandPlants) Phylogenetic Tree(s): OG_05_0000412_tree ,
OG_06_0000454 (SeedPlants) Phylogenetic Tree(s): OG_06_0000454_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g098050.3.1
Cluster HCCA: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00095p00113890 evm_27.TU.AmTr_v1... Calmodulin OS=Medicago sativa 0.02 Archaeplastida
AT1G66410 ACAM-4, CAM4 calmodulin 4 0.02 Archaeplastida
AT3G22930 CML11 calmodulin-like 11 0.01 Archaeplastida
AT3G50360 CEN2, CEN1, ATCEN2 centrin2 0.03 Archaeplastida
AT4G03290 No alias EF hand calcium-binding protein family 0.01 Archaeplastida
AT4G12860 UNE14 EF hand calcium-binding protein family 0.01 Archaeplastida
AT4G37010 CEN2 centrin 2 0.02 Archaeplastida
Cre03.g178150 No alias Calmodulin OS=Chlamydomonas reinhardtii 0.04 Archaeplastida
Solyc10g074740.2.1 No alias Calcium-binding protein CAST OS=Solanum tuberosum... 0.03 Archaeplastida
Solyc12g009630.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e010984_P001 No alias Probable calcium-binding protein CML32 OS=Oryza sativa... 0.03 Archaeplastida
Zm00001e010998_P001 No alias Calmodulin-related protein OS=Petunia hybrida... 0.04 Archaeplastida
Zm00001e024051_P001 No alias Putative calmodulin-like protein 2 OS=Oryza sativa... 0.02 Archaeplastida
Zm00001e031053_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e039793_P001 No alias Probable calcium-binding protein CML28 OS=Oryza sativa... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 13 73
IPR002048 EF_hand_dom 83 146
No external refs found!