Description : RIS-Complex miRNA recruiting factor (AGO1)
Gene families : OG0000124 (Archaeplastida) Phylogenetic Tree(s): OG0000124_tree ,
OG_05_0000677 (LandPlants) Phylogenetic Tree(s): OG_05_0000677_tree ,
OG_06_0000508 (SeedPlants) Phylogenetic Tree(s): OG_06_0000508_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc03g098280.4.1 | |
Cluster | HCCA: Cluster_38 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00008p00203090 | evm_27.TU.AmTr_v1... | Chromatin organisation.DNA methylation.canonical... | 0.06 | Archaeplastida | |
AMTR_s00008p00203230 | evm_27.TU.AmTr_v1... | Protein argonaute 16 OS=Oryza sativa subsp. japonica | 0.03 | Archaeplastida | |
AMTR_s00058p00069070 | evm_27.TU.AmTr_v1... | Chromatin organisation.DNA methylation.canonical... | 0.03 | Archaeplastida | |
AT1G48410 | AGO1 | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | 0.06 | Archaeplastida | |
AT2G27040 | AGO4, OCP11 | Argonaute family protein | 0.04 | Archaeplastida | |
AT5G43810 | PNH, AGO10, ZLL | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | 0.04 | Archaeplastida | |
GSVIVT01018054001 | No alias | Chromatin organisation.DNA methylation.canonical... | 0.03 | Archaeplastida | |
GSVIVT01029383001 | No alias | Chromatin organisation.DNA methylation.canonical... | 0.05 | Archaeplastida | |
GSVIVT01037488001 | No alias | Chromatin organisation.DNA methylation.canonical... | 0.06 | Archaeplastida | |
Gb_34718 | No alias | Protein argonaute 10 OS=Arabidopsis thaliana... | 0.05 | Archaeplastida | |
LOC_Os02g58490.1 | No alias | RIS-Complex miRNA recruiting factor (AGO1) | 0.09 | Archaeplastida | |
LOC_Os04g06770.2 | No alias | siRNA-integrating factor (AGO) | 0.06 | Archaeplastida | |
LOC_Os04g47870.1 | No alias | RIS-Complex miRNA recruiting factor (AGO1) | 0.05 | Archaeplastida | |
LOC_Os06g39640.1 | No alias | RIS-Complex miRNA recruiting factor (AGO1) | 0.07 | Archaeplastida | |
MA_118377g0010 | No alias | RIS-Complex miRNA recruiting factor (AGO1) | 0.05 | Archaeplastida | |
MA_14457g0010 | No alias | Protein argonaute 4A OS=Oryza sativa subsp. japonica... | 0.03 | Archaeplastida | |
MA_14457g0020 | No alias | Protein argonaute 4B OS=Oryza sativa subsp. japonica... | 0.04 | Archaeplastida | |
MA_158278g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
MA_18547g0010 | No alias | Protein argonaute 1A OS=Oryza sativa subsp. japonica... | 0.03 | Archaeplastida | |
Mp1g18110.1 | No alias | RIS-Complex miRNA recruiting factor (AGO1) | 0.05 | Archaeplastida | |
Pp3c1_35770V3.1 | No alias | Stabilizer of iron transporter SufD / Polynucleotidyl transferase | 0.02 | Archaeplastida | |
Smo446086 | No alias | Chromatin organisation.DNA methylation.canonical... | 0.02 | Archaeplastida | |
Solyc02g069260.3.1 | No alias | siRNA-binding factor (AGO2) of non-canonical RdDM pathway | 0.02 | Archaeplastida | |
Zm00001e025496_P001 | No alias | siRNA-integrating factor (AGO) | 0.03 | Archaeplastida | |
Zm00001e029696_P001 | No alias | RIS-Complex miRNA recruiting factor (AGO1) | 0.05 | Archaeplastida | |
Zm00001e037347_P002 | No alias | RIS-Complex miRNA recruiting factor (AGO1) | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005515 | protein binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000075 | cell cycle checkpoint | IEP | Neighborhood |
BP | GO:0000077 | DNA damage checkpoint | IEP | Neighborhood |
CC | GO:0000151 | ubiquitin ligase complex | IEP | Neighborhood |
CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | Neighborhood |
BP | GO:0000272 | polysaccharide catabolic process | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | Neighborhood |
MF | GO:0004523 | RNA-DNA hybrid ribonuclease activity | IEP | Neighborhood |
MF | GO:0005085 | guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
MF | GO:0005086 | ARF guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
MF | GO:0005088 | Ras guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
MF | GO:0005089 | Rho guanyl-nucleotide exchange factor activity | IEP | Neighborhood |
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
CC | GO:0005680 | anaphase-promoting complex | IEP | Neighborhood |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0006259 | DNA metabolic process | IEP | Neighborhood |
BP | GO:0006270 | DNA replication initiation | IEP | Neighborhood |
BP | GO:0006298 | mismatch repair | IEP | Neighborhood |
BP | GO:0006351 | transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | Neighborhood |
MF | GO:0008144 | drug binding | IEP | Neighborhood |
BP | GO:0009966 | regulation of signal transduction | IEP | Neighborhood |
BP | GO:0010646 | regulation of cell communication | IEP | Neighborhood |
MF | GO:0016160 | amylase activity | IEP | Neighborhood |
MF | GO:0016161 | beta-amylase activity | IEP | Neighborhood |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Neighborhood |
MF | GO:0017016 | Ras GTPase binding | IEP | Neighborhood |
MF | GO:0017048 | Rho GTPase binding | IEP | Neighborhood |
MF | GO:0019899 | enzyme binding | IEP | Neighborhood |
BP | GO:0023051 | regulation of signaling | IEP | Neighborhood |
MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
MF | GO:0030983 | mismatched DNA binding | IEP | Neighborhood |
MF | GO:0031267 | small GTPase binding | IEP | Neighborhood |
CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | Neighborhood |
BP | GO:0031570 | DNA integrity checkpoint | IEP | Neighborhood |
BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | Neighborhood |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
BP | GO:0032774 | RNA biosynthetic process | IEP | Neighborhood |
BP | GO:0033554 | cellular response to stress | IEP | Neighborhood |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | Neighborhood |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Neighborhood |
BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0045786 | negative regulation of cell cycle | IEP | Neighborhood |
BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | Neighborhood |
BP | GO:0048523 | negative regulation of cellular process | IEP | Neighborhood |
BP | GO:0048583 | regulation of response to stimulus | IEP | Neighborhood |
MF | GO:0051020 | GTPase binding | IEP | Neighborhood |
BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | Neighborhood |
BP | GO:0051716 | cellular response to stimulus | IEP | Neighborhood |
BP | GO:0051726 | regulation of cell cycle | IEP | Neighborhood |
BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
BP | GO:0097659 | nucleic acid-templated transcription | IEP | Neighborhood |
MF | GO:0097747 | RNA polymerase activity | IEP | Neighborhood |
MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Neighborhood |
BP | GO:1902531 | regulation of intracellular signal transduction | IEP | Neighborhood |
No external refs found! |