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  5. Solyc03g098470.3.1

Solyc03g098470.3.1


Description : component Sm-E of U1/U2/U4/U5-associated Sm accessory ribonucleoprotein complex


Gene families : OG0003300 (Archaeplastida) Phylogenetic Tree(s): OG0003300_tree ,
OG_05_0003792 (LandPlants) Phylogenetic Tree(s): OG_05_0003792_tree ,
OG_06_0004547 (SeedPlants) Phylogenetic Tree(s): OG_06_0004547_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g098470.3.1
Cluster HCCA: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020563.151 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.01 Archaeplastida
Cre08.g385200 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.01 Archaeplastida
LOC_Os02g03440.1 No alias component Sm-E of U1/U2/U4/U5-associated Sm accessory... 0.06 Archaeplastida
Mp5g07450.1 No alias component Sm-E of U1/U2/U4/U5-associated Sm accessory... 0.04 Archaeplastida
Zm00001e039734_P001 No alias component Sm-E of U1/U2/U4/U5-associated Sm accessory... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
InterPro domains Description Start Stop
IPR001163 LSM_dom_euk/arc 20 83
No external refs found!