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  5. Solyc03g111730.3.1

Solyc03g111730.3.1


Description : protease (Papain)


Gene families : OG0000108 (Archaeplastida) Phylogenetic Tree(s): OG0000108_tree ,
OG_05_0000044 (LandPlants) Phylogenetic Tree(s): OG_05_0000044_tree ,
OG_06_0002750 (SeedPlants) Phylogenetic Tree(s): OG_06_0002750_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g111730.3.1
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00249780 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.03 Archaeplastida
AMTR_s00016p00253110 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.03 Archaeplastida
AMTR_s00021p00031000 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.03 Archaeplastida
AMTR_s00022p00165270 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.05 Archaeplastida
AMTR_s00049p00133800 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.03 Archaeplastida
AMTR_s00061p00215860 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00374p00005120 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.03 Archaeplastida
AT1G20850 XCP2 xylem cysteine peptidase 2 0.03 Archaeplastida
AT1G47128 RD21, RD21A Granulin repeat cysteine protease family protein 0.03 Archaeplastida
AT3G48340 No alias Cysteine proteinases superfamily protein 0.03 Archaeplastida
AT4G35350 XCP1 xylem cysteine peptidase 1 0.03 Archaeplastida
AT5G45890 SAG12 senescence-associated gene 12 0.03 Archaeplastida
AT5G50260 No alias Cysteine proteinases superfamily protein 0.11 Archaeplastida
Cre05.g247851 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre09.g407700 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01000582001 No alias Protein degradation.peptidase families.cysteine-type... 0.07 Archaeplastida
GSVIVT01007585001 No alias Protein degradation.peptidase families.cysteine-type... 0.03 Archaeplastida
GSVIVT01009796001 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01020657001 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01021223001 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01023863001 No alias Protein degradation.peptidase families.cysteine-type... 0.03 Archaeplastida
Gb_10444 No alias protease (Papain) 0.02 Archaeplastida
Gb_19399 No alias Prgrammed Cell Death cysteine protease (XCP) 0.05 Archaeplastida
Gb_31936 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g73980.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.03 Archaeplastida
LOC_Os04g12660.1 No alias Senescence-specific cysteine protease SAG39 OS=Oryza... 0.03 Archaeplastida
LOC_Os04g13090.1 No alias protease (Papain) 0.04 Archaeplastida
LOC_Os04g13140.1 No alias protease (Papain) 0.02 Archaeplastida
LOC_Os04g55650.1 No alias Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
LOC_Os05g01810.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.03 Archaeplastida
LOC_Os08g44270.1 No alias protease (Papain) 0.03 Archaeplastida
LOC_Os09g38920.1 No alias Senescence-specific cysteine protease SAG12... 0.03 Archaeplastida
LOC_Os11g14900.4 No alias protease (Papain) 0.02 Archaeplastida
LOC_Os12g17540.1 No alias protease (Papain) 0.04 Archaeplastida
MA_10425982g0010 No alias Cysteine protease XCP1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10429635g0010 No alias Cysteine protease XCP1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_36514g0010 No alias Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase... 0.02 Archaeplastida
Mp1g01840.1 No alias Probable cysteine protease RD21B OS=Arabidopsis thaliana... 0.04 Archaeplastida
Mp8g12950.1 No alias Cysteine proteinase RD21A OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c23_20820V3.1 No alias Granulin repeat cysteine protease family protein 0.03 Archaeplastida
Pp3c8_20370V3.1 No alias Granulin repeat cysteine protease family protein 0.02 Archaeplastida
Solyc02g077040.4.1 No alias Senescence-specific cysteine protease SAG12... 0.04 Archaeplastida
Solyc04g082710.4.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.05 Archaeplastida
Solyc12g094700.3.1 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.04 Archaeplastida
Zm00001e003949_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e010091_P001 No alias Senescence-specific cysteine protease SAG12... 0.02 Archaeplastida
Zm00001e021376_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e021469_P001 No alias Senescence-specific cysteine protease SAG39 OS=Oryza... 0.03 Archaeplastida
Zm00001e029667_P001 No alias protease (Papain). Prgrammed Cell Death cysteine protease (XCP) 0.05 Archaeplastida
Zm00001e030283_P001 No alias Oryzain alpha chain OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEA Interproscan
MF GO:0008234 cysteine-type peptidase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005384 manganese ion transmembrane transporter activity IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0030026 cellular manganese ion homeostasis IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0046916 cellular transition metal ion homeostasis IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055071 manganese ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000668 Peptidase_C1A_C 126 342
IPR013201 Prot_inhib_I29 38 93
No external refs found!