1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g111870.3.1

Solyc03g111870.3.1


Description : RING-HC-class E3 ligase. ligating E3 protein (RGLG)


Gene families : OG0000512 (Archaeplastida) Phylogenetic Tree(s): OG0000512_tree ,
OG_05_0000782 (LandPlants) Phylogenetic Tree(s): OG_05_0000782_tree ,
OG_06_0000626 (SeedPlants) Phylogenetic Tree(s): OG_06_0000626_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g111870.3.1
Cluster HCCA: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00166p00070360 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT1G79380 No alias Ca(2)-dependent phospholipid-binding protein (Copine) family 0.03 Archaeplastida
GSVIVT01032380001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Zm00001e017810_P001 No alias RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.03 Archaeplastida
Zm00001e018895_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e037447_P002 No alias RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.08 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016972 thiol oxidase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR010734 Copine 111 324
No external refs found!