1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g112880.1.1

Solyc03g112880.1.1


Description : fasciclin-type arabinogalactan protein. regulatory factor SOS5 of SOS (Salt Overly Sensitive) signalling pathway


Gene families : OG0000381 (Archaeplastida) Phylogenetic Tree(s): OG0000381_tree ,
OG_05_0000190 (LandPlants) Phylogenetic Tree(s): OG_05_0000190_tree ,
OG_06_0002391 (SeedPlants) Phylogenetic Tree(s): OG_06_0002391_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g112880.1.1
Cluster HCCA: Cluster_259

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g26320.1 No alias fasciclin-type arabinogalactan protein 0.02 Archaeplastida
LOC_Os05g38500.1 No alias fasciclin-type arabinogalactan protein. regulatory... 0.03 Archaeplastida
Solyc07g045440.1.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Solyc10g005960.1.1 No alias fasciclin-type arabinogalactan protein 0.04 Archaeplastida
Zm00001e024334_P001 No alias fasciclin-type arabinogalactan protein 0.03 Archaeplastida
Zm00001e028773_P001 No alias fasciclin-type arabinogalactan protein. regulatory... 0.04 Archaeplastida
Zm00001e031109_P001 No alias fasciclin-type arabinogalactan protein 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Neighborhood
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Neighborhood
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Neighborhood
BP GO:0009112 nucleobase metabolic process IEP Neighborhood
BP GO:0009116 nucleoside metabolic process IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Neighborhood
BP GO:0046112 nucleobase biosynthetic process IEP Neighborhood
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Neighborhood
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
BP GO:1901657 glycosyl compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000782 FAS1_domain 42 183
IPR000782 FAS1_domain 210 345
No external refs found!