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  5. Solyc03g113100.3.1

Solyc03g113100.3.1


Description : ubiquitin-conjugating E2 protein


Gene families : OG0000900 (Archaeplastida) Phylogenetic Tree(s): OG0000900_tree ,
OG_05_0002020 (LandPlants) Phylogenetic Tree(s): OG_05_0002020_tree ,
OG_06_0002099 (SeedPlants) Phylogenetic Tree(s): OG_06_0002099_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g113100.3.1
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AT2G02760 ATUBC2, UBC2 ubiquiting-conjugating enzyme 2 0.03 Archaeplastida
Cpa|evm.model.tig00000737.3 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
Cre06.g294850 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
LOC_Os03g57790.1 No alias ubiquitin-conjugating E2 protein 0.03 Archaeplastida
MA_16089g0010 No alias ubiquitin-conjugating E2 protein 0.03 Archaeplastida
Mp8g17960.1 No alias ubiquitin-conjugating E2 protein 0.02 Archaeplastida
Zm00001e011475_P001 No alias ubiquitin-conjugating E2 protein 0.03 Archaeplastida
Zm00001e032886_P001 No alias ubiquitin-conjugating E2 protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
CC GO:0000813 ESCRT I complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
MF GO:0010011 auxin binding IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
BP GO:0016197 endosomal transport IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEP Neighborhood
CC GO:0009890GO:0036452 ESCRT complex IEP Neighborhood
MF GO:0042562 hormone binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0071985 multivesicular body sorting pathway IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 8 144
No external refs found!