Description : pectate lyase
Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0000111 (LandPlants) Phylogenetic Tree(s): OG_05_0000111_tree ,
OG_06_0000097 (SeedPlants) Phylogenetic Tree(s): OG_06_0000097_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc03g113150.3.1 | |
Cluster | HCCA: Cluster_180 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00078p00106380 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | Archaeplastida | |
AMTR_s00120p00111300 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
AT1G14420 | AT59 | Pectate lyase family protein | 0.06 | Archaeplastida | |
AT1G67750 | No alias | Pectate lyase family protein | 0.07 | Archaeplastida | |
AT2G02720 | No alias | Pectate lyase family protein | 0.06 | Archaeplastida | |
AT3G01270 | No alias | Pectate lyase family protein | 0.03 | Archaeplastida | |
AT3G07010 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
AT3G24670 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
AT3G54920 | PMR6 | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
AT4G13710 | No alias | Pectin lyase-like superfamily protein | 0.04 | Archaeplastida | |
AT5G15110 | No alias | Pectate lyase family protein | 0.02 | Archaeplastida | |
AT5G48900 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
AT5G63180 | No alias | Pectin lyase-like superfamily protein | 0.08 | Archaeplastida | |
GSVIVT01000592001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.05 | Archaeplastida | |
GSVIVT01008053001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.07 | Archaeplastida | |
GSVIVT01011348001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.08 | Archaeplastida | |
GSVIVT01020067001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.08 | Archaeplastida | |
GSVIVT01020068001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.07 | Archaeplastida | |
GSVIVT01029048001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.02 | Archaeplastida | |
Gb_26755 | No alias | pectate lyase | 0.04 | Archaeplastida | |
LOC_Os02g12300.1 | No alias | pectate lyase | 0.02 | Archaeplastida | |
LOC_Os04g05050.1 | No alias | pectate lyase | 0.04 | Archaeplastida | |
LOC_Os06g05260.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
LOC_Os06g38510.2 | No alias | pectate lyase | 0.05 | Archaeplastida | |
MA_10429028g0020 | No alias | pectate lyase | 0.06 | Archaeplastida | |
MA_10430145g0030 | No alias | pectate lyase | 0.04 | Archaeplastida | |
MA_10437227g0030 | No alias | pectate lyase | 0.05 | Archaeplastida | |
MA_52869g0010 | No alias | no hits & (original description: none) | 0.07 | Archaeplastida | |
Mp8g10190.1 | No alias | pectate lyase | 0.02 | Archaeplastida | |
Pp3c10_20140V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
Pp3c14_6710V3.1 | No alias | Pectin lyase-like superfamily protein | 0.03 | Archaeplastida | |
Pp3c1_35100V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
Solyc02g067450.4.1 | No alias | pectate lyase | 0.04 | Archaeplastida | |
Solyc02g087670.3.1 | No alias | pectate lyase | 0.04 | Archaeplastida | |
Solyc03g058910.3.1 | No alias | pectate lyase | 0.04 | Archaeplastida | |
Solyc05g007080.4.1 | No alias | pectate lyase | 0.04 | Archaeplastida | |
Solyc06g083580.4.1 | No alias | pectate lyase | 0.05 | Archaeplastida | |
Zm00001e024959_P001 | No alias | pectate lyase | 0.05 | Archaeplastida | |
Zm00001e037311_P001 | No alias | pectate lyase | 0.05 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0030570 | pectate lyase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005215 | transporter activity | IEP | Neighborhood |
MF | GO:0015077 | monovalent inorganic cation transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015267 | channel activity | IEP | Neighborhood |
MF | GO:0015291 | secondary active transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015297 | antiporter activity | IEP | Neighborhood |
MF | GO:0015298 | solute:cation antiporter activity | IEP | Neighborhood |
MF | GO:0015299 | solute:proton antiporter activity | IEP | Neighborhood |
CC | GO:0016020 | membrane | IEP | Neighborhood |
MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Neighborhood |
MF | GO:0022803 | passive transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0022857 | transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0030599 | pectinesterase activity | IEP | Neighborhood |
BP | GO:0042545 | cell wall modification | IEP | Neighborhood |
BP | GO:0045229 | external encapsulating structure organization | IEP | Neighborhood |
MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | Neighborhood |
BP | GO:0055085 | transmembrane transport | IEP | Neighborhood |
BP | GO:0071554 | cell wall organization or biogenesis | IEP | Neighborhood |
BP | GO:0071555 | cell wall organization | IEP | Neighborhood |
No external refs found! |