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  5. Solyc03g113500.4.1

Solyc03g113500.4.1


Description : DDT domain-containing protein DDR4 OS=Arabidopsis thaliana (sp|f4idy7|ddr4_arath : 507.0)


Gene families : OG0002074 (Archaeplastida) Phylogenetic Tree(s): OG0002074_tree ,
OG_05_0002134 (LandPlants) Phylogenetic Tree(s): OG_05_0002134_tree ,
OG_06_0002239 (SeedPlants) Phylogenetic Tree(s): OG_06_0002239_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g113500.4.1
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AT1G18950 No alias DDT domain superfamily 0.09 Archaeplastida
AT5G25580 No alias BEST Arabidopsis thaliana protein match is: DDT domain... 0.05 Archaeplastida
Cpa|evm.model.tig00020825.11 No alias No description available 0.05 Archaeplastida
GSVIVT01008087001 No alias DDT domain-containing protein DDR4 OS=Arabidopsis thaliana 0.08 Archaeplastida
Gb_13312 No alias DDT domain-containing protein DDR4 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os07g09580.1 No alias DDT domain-containing protein DDR4 OS=Arabidopsis... 0.08 Archaeplastida
MA_10426270g0020 No alias DDT domain-containing protein DDR4 OS=Arabidopsis... 0.03 Archaeplastida
MA_34255g0010 No alias DDT domain-containing protein DDR4 OS=Arabidopsis... 0.03 Archaeplastida
MA_78910g0010 No alias DDT domain-containing protein DDR4 OS=Arabidopsis... 0.02 Archaeplastida
Pp3c1_8040V3.1 No alias DDT domain superfamily 0.03 Archaeplastida
Smo411205 No alias DDT domain-containing protein DDR4 OS=Arabidopsis thaliana 0.04 Archaeplastida
Solyc08g068050.3.1 No alias DDT domain-containing protein DDR4 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e006041_P001 No alias DDT domain-containing protein DDR4 OS=Arabidopsis... 0.1 Archaeplastida
Zm00001e011411_P001 No alias DDT domain-containing protein DDR4 OS=Arabidopsis... 0.1 Archaeplastida
Zm00001e011412_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e033055_P001 No alias DDT domain-containing protein DDR4 OS=Arabidopsis... 0.1 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
BP GO:0000272 polysaccharide catabolic process IEP Neighborhood
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007051 spindle organization IEP Neighborhood
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0016160 amylase activity IEP Neighborhood
MF GO:0016161 beta-amylase activity IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
MF GO:0034062 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0051225 spindle assembly IEP Neighborhood
CC GO:0070461 SAGA-type complex IEP Neighborhood
CC GO:0070652 HAUS complex IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:0097747 RNA polymerase activity IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR018501 DDT_dom 162 207
IPR028942 WHIM1_dom 253 283
No external refs found!