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  5. Solyc03g113620.3.1

Solyc03g113620.3.1


Description : transcription factor (MYB-related)


Gene families : OG0000067 (Archaeplastida) Phylogenetic Tree(s): OG0000067_tree ,
OG_05_0000426 (LandPlants) Phylogenetic Tree(s): OG_05_0000426_tree ,
OG_06_0000467 (SeedPlants) Phylogenetic Tree(s): OG_06_0000467_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g113620.3.1
Cluster HCCA: Cluster_143

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00040070 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00045p00096080 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT3G10580 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT4G36570 ATRL3, RL3 RAD-like 3 0.02 Archaeplastida
AT5G01200 No alias Duplicated homeodomain-like superfamily protein 0.06 Archaeplastida
AT5G23650 No alias Homeodomain-like transcriptional regulator 0.02 Archaeplastida
AT5G47290 No alias myb family transcription factor 0.03 Archaeplastida
AT5G56840 No alias myb-like transcription factor family protein 0.03 Archaeplastida
GSVIVT01015223001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01016370001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01016996001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01024794001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_35973 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Gb_38499 No alias transcription factor (MYB-related) 0.05 Archaeplastida
LOC_Os01g09280.1 No alias transcription factor (MYB-related) 0.02 Archaeplastida
LOC_Os01g63460.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
LOC_Os05g10690.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
LOC_Os05g37730.1 No alias transcription factor (MYB-related) 0.04 Archaeplastida
MA_16729g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_209399g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_267974g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_413315g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_41803g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
MA_488767g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_6326342g0010 No alias transcription factor (MYB-related) 0.02 Archaeplastida
MA_957399g0010 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Pp3c4_5410V3.1 No alias myb-like transcription factor family protein 0.02 Archaeplastida
Solyc04g005100.3.1 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Solyc05g052610.3.1 No alias transcription factor (MYB-related) 0.07 Archaeplastida
Solyc11g006720.2.1 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Solyc12g008800.3.1 No alias transcription factor (MYB-related) 0.06 Archaeplastida
Zm00001e016939_P001 No alias transcription factor (MYB-related) 0.05 Archaeplastida
Zm00001e019190_P001 No alias transcription factor (MYB-related) 0.07 Archaeplastida
Zm00001e019254_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e020633_P001 No alias transcription factor (MYB-related) 0.08 Archaeplastida
Zm00001e025783_P002 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e025784_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida
Zm00001e027835_P005 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e028675_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e028729_P001 No alias transcription factor (MYB-related) 0.06 Archaeplastida
Zm00001e031755_P001 No alias transcription factor (MYB-related) 0.03 Archaeplastida
Zm00001e032519_P001 No alias transcription factor (MYB-related) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 116 160
No external refs found!