Solyc03g113690.1.1

Description : subfamily ABCG transporter

Gene families : OG0001052 (Archaeplastida) Phylogenetic Tree(s): OG0001052_tree ,
OG_05_0001355 (LandPlants) Phylogenetic Tree(s): OG_05_0001355_tree ,
OG_06_0001266 (SeedPlants) Phylogenetic Tree(s): OG_06_0001266_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g113690.1.1
Cluster	HCCA: Cluster_59

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00063p00178530	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
AT1G53270	No alias	ABC-2 type transporter family protein	0.13	Archaeplastida
AT2G13610	No alias	ABC-2 type transporter family protein	0.05	Archaeplastida
AT5G19410	No alias	ABC-2 type transporter family protein	0.14	Archaeplastida
GSVIVT01014222001	No alias	ABC transporter G family member 10 OS=Arabidopsis thaliana	0.15	Archaeplastida
GSVIVT01022346001	No alias	ABC transporter G family member 5 OS=Arabidopsis thaliana	0.03	Archaeplastida
GSVIVT01037274001	No alias	Solute transport.primary active transport.ABC...	0.15	Archaeplastida
Gb_24085	No alias	subfamily ABCG transporter	0.02	Archaeplastida
LOC_Os01g42900.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
MA_103974g0010	No alias	ABC transporter G family member 5 OS=Arabidopsis...	0.12	Archaeplastida
Mp1g25240.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Mp2g07990.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Mp5g04860.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Mp5g05620.1	No alias	subfamily ABCG transporter	0.03	Archaeplastida
Mp5g15770.1	No alias	subfamily ABCG transporter	0.04	Archaeplastida
Pp3c18_7000V3.1	No alias	ABC-2 type transporter family protein	0.06	Archaeplastida
Pp3c18_7010V3.1	No alias	ABC-2 type transporter family protein	0.05	Archaeplastida
Pp3c22_15570V3.1	No alias	ABC-2 type transporter family protein	0.02	Archaeplastida
Pp3c26_3590V3.1	No alias	ABC-2 type transporter family protein	0.03	Archaeplastida
Pp3c3_34730V3.1	No alias	ABC-2 type transporter family protein	0.05	Archaeplastida
Pp3c5_16290V3.1	No alias	ABC-2 type transporter family protein	0.05	Archaeplastida
Smo88976	No alias	Solute transport.primary active transport.ABC...	0.05	Archaeplastida
Smo93898	No alias	Solute transport.primary active transport.ABC...	0.03	Archaeplastida
Zm00001e020697_P001	No alias	subfamily ABCG transporter	0.05	Archaeplastida
Zm00001e031556_P001	No alias	subfamily ABCG transporter	0.12	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0004144	diacylglycerol O-acyltransferase activity	IEP	Neighborhood
MF	GO:0005506	iron ion binding	IEP	Neighborhood
MF	GO:0005507	copper ion binding	IEP	Neighborhood
MF	GO:0008194	UDP-glycosyltransferase activity	IEP	Neighborhood
MF	GO:0008374	O-acyltransferase activity	IEP	Neighborhood
MF	GO:0016411	acylglycerol O-acyltransferase activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016746	transferase activity, transferring acyl groups	IEP	Neighborhood
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046914	transition metal ion binding	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013525	ABC_2_trans	383	591
IPR003439	ABC_transporter-like	92	245

External Links

No external refs found!

Solyc03g113690.1.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation