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  4. Sequence
  5. Solyc03g114230.2.1

Solyc03g114230.2.1


Description : Transcription factor bHLH162 OS=Arabidopsis thaliana (sp|f4jij7|bh162_arath : 92.0)


Gene families : OG0001232 (Archaeplastida) Phylogenetic Tree(s): OG0001232_tree ,
OG_05_0000765 (LandPlants) Phylogenetic Tree(s): OG_05_0000765_tree ,
OG_06_0004627 (SeedPlants) Phylogenetic Tree(s): OG_06_0004627_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g114230.2.1
Cluster HCCA: Cluster_176

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00269070 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00001p00269160 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.08 Archaeplastida
AMTR_s00032p00045230 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00038p00167360 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT1G10585 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.07 Archaeplastida
AT1G12540 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.08 Archaeplastida
AT1G62975 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.09 Archaeplastida
AT4G20970 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT4G25410 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Archaeplastida
GSVIVT01007772001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01018460001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01018461001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
GSVIVT01020561001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.07 Archaeplastida
Gb_26737 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os01g01870.1 No alias no hits & (original description: none) 0.12 Archaeplastida
MA_14352g0010 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_14544g0010 No alias transcription factor (bHLH) 0.05 Archaeplastida
MA_321195g0010 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_8008760g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_938775g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc03g006910.3.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
Solyc03g114237.1.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc06g035490.3.1 No alias transcription factor (bHLH) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0005102 signaling receptor binding IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
MF GO:0008083 growth factor activity IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
BP GO:0008283 cell proliferation IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
MF GO:0010333 terpene synthase activity IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0030545 receptor regulator activity IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048018 receptor ligand activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!