Description : component TOUGH of DCL1-HYL1 miRNA biogenesis complex

Gene families : OG0006076 (Archaeplastida) Phylogenetic Tree(s): OG0006076_tree ,
OG_05_0006644 (LandPlants) Phylogenetic Tree(s): OG_05_0006644_tree ,
OG_06_0007400 (SeedPlants) Phylogenetic Tree(s): OG_06_0007400_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: Solyc03g114410.3.1
Cluster HCCA: Cluster_127

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01008206001 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.04 Archaeplastida
Pp3c6_280V3.1 No alias SWAP (Suppressor-of-White-APricot)/surp domain-containing protein 0.04 Archaeplastida
Zm00001e036975_P003 No alias component TOUGH of DCL1-HYL1 miRNA biogenesis complex 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006396 RNA processing IEA Interproscan
BP GO:0006397 mRNA processing IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0003917 DNA topoisomerase type I activity IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0010921 regulation of phosphatase activity IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0019220 regulation of phosphate metabolic process IEP Neighborhood
MF GO:0019902 phosphatase binding IEP Neighborhood
MF GO:0019903 protein phosphatase binding IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
BP GO:0031399 regulation of protein modification process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
BP GO:0035303 regulation of dephosphorylation IEP Neighborhood
BP GO:0035304 regulation of protein dephosphorylation IEP Neighborhood
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0051174 regulation of phosphorus metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051336 regulation of hydrolase activity IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR011666 DUF1604 39 110
IPR000061 Surp 410 457
No external refs found!