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  5. Solyc03g114680.3.1

Solyc03g114680.3.1


Description : E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana (sp|q8lpn7|rng1l_arath : 114.0)


Gene families : OG0000041 (Archaeplastida) Phylogenetic Tree(s): OG0000041_tree ,
OG_05_0000046 (LandPlants) Phylogenetic Tree(s): OG_05_0000046_tree ,
OG_06_0001225 (SeedPlants) Phylogenetic Tree(s): OG_06_0001225_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g114680.3.1
Cluster HCCA: Cluster_137

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g20870.1 No alias E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp.... 0.02 Archaeplastida
LOC_Os09g17610.1 No alias no hits & (original description: none) 0.01 Archaeplastida
MA_44557g0010 No alias E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c1_42450V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Zm00001e009715_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e019544_P001 No alias Probable E3 ubiquitin-protein ligase RHC1A... 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 364 406
No external refs found!