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Description : COB cellulose microfibrils and hemicellulose interaction protein
Gene families : OG0000661 (Archaeplastida) Phylogenetic Tree(s): OG0000661_tree ,
OG_05_0000695 (LandPlants) Phylogenetic Tree(s): OG_05_0000695_tree ,
OG_06_0031682 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc03g114890.4.1 | |
| Cluster | HCCA: Cluster_7 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00008p00083860 | evm_27.TU.AmTr_v1... | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.03 | Archaeplastida | |
| GSVIVT01024110001 | No alias | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.02 | Archaeplastida | |
| GSVIVT01036566001 | No alias | Cell wall.cellulose.synthesis.cellulose microfibrils and... | 0.03 | Archaeplastida | |
| Gb_25603 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.05 | Archaeplastida | |
| Gb_36719 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | Archaeplastida | |
| MA_40967g0020 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | Archaeplastida | |
| Pp3c12_4550V3.1 | No alias | COBRA-like protein 1 precursor | 0.02 | Archaeplastida | |
| Pp3c2_9820V3.1 | No alias | COBRA-like protein 1 precursor | 0.02 | Archaeplastida | |
| Solyc03g070440.4.1 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | Archaeplastida | |
| Solyc03g114900.3.1 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.03 | Archaeplastida | |
| Zm00001e035505_P001 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | Archaeplastida | |
| Zm00001e038043_P001 | No alias | COB cellulose microfibrils and hemicellulose interaction protein | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0010215 | cellulose microfibril organization | IEA | Interproscan |
| CC | GO:0031225 | anchored component of membrane | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005516 | calmodulin binding | IEP | Neighborhood |
| MF | GO:0015276 | ligand-gated ion channel activity | IEP | Neighborhood |
| MF | GO:0016624 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor | IEP | Neighborhood |
| MF | GO:0016903 | oxidoreductase activity, acting on the aldehyde or oxo group of donors | IEP | Neighborhood |
| MF | GO:0017076 | purine nucleotide binding | IEP | Neighborhood |
| MF | GO:0022834 | ligand-gated channel activity | IEP | Neighborhood |
| MF | GO:0022836 | gated channel activity | IEP | Neighborhood |
| MF | GO:0022839 | ion gated channel activity | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0032553 | ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0043531 | ADP binding | IEP | Neighborhood |
| BP | GO:0055114 | oxidation-reduction process | IEP | Neighborhood |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006918 | COBRA_pln | 45 | 208 |
| No external refs found! |