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  5. Solyc03g115150.4.1

Solyc03g115150.4.1


Description : class-II histone deacetylase


Gene families : OG0001854 (Archaeplastida) Phylogenetic Tree(s): OG0001854_tree ,
OG_05_0005415 (LandPlants) Phylogenetic Tree(s): OG_05_0005415_tree ,
OG_06_0006816 (SeedPlants) Phylogenetic Tree(s): OG_06_0006816_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g115150.4.1
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000093.133 No alias Histone deacetylase 5 OS=Arabidopsis thaliana 0.02 Archaeplastida
Cre11.g467706 No alias Chromatin organisation.histone modifications.histone... 0.02 Archaeplastida
LOC_Os07g41090.1 No alias class-II histone deacetylase 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004386 helicase activity IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0005986 sucrose biosynthetic process IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015098 molybdate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
BP GO:0015689 molybdate ion transport IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0019203 carbohydrate phosphatase activity IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
MF GO:0043015 gamma-tubulin binding IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
MF GO:0050307 sucrose-phosphate phosphatase activity IEP Neighborhood
MF GO:0050308 sugar-phosphatase activity IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 28 327
No external refs found!