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Description : alpha-class expansin
Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0016604 (LandPlants) Phylogenetic Tree(s): OG_05_0016604_tree ,
OG_06_0016213 (SeedPlants) Phylogenetic Tree(s): OG_06_0016213_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc03g115300.2.1 | |
| Cluster | HCCA: Cluster_6 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00012p00230920 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.04 | Archaeplastida | |
| AMTR_s00022p00153780 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | Archaeplastida | |
| AMTR_s00077p00063420 | evm_27.TU.AmTr_v1... | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | Archaeplastida | |
| AMTR_s00110p00103570 | evm_27.TU.AmTr_v1... | Expansin-A4 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
| AT3G29030 | EXP5, ATHEXP... | expansin A5 | 0.03 | Archaeplastida | |
| AT4G38210 | ATEXPA20,... | expansin A20 | 0.03 | Archaeplastida | |
| AT5G05290 | EXPA2, ATHEXP... | expansin A2 | 0.03 | Archaeplastida | |
| AT5G39280 | ATHEXP ALPHA ... | expansin A23 | 0.04 | Archaeplastida | |
| AT5G39300 | ATEXPA25,... | expansin A25 | 0.03 | Archaeplastida | |
| GSVIVT01008762001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| GSVIVT01016525001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| GSVIVT01019965001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| GSVIVT01028474001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.05 | Archaeplastida | |
| GSVIVT01030191001 | No alias | Expansin-A8 OS=Arabidopsis thaliana | 0.04 | Archaeplastida | |
| GSVIVT01032935001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.06 | Archaeplastida | |
| GSVIVT01033691001 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| Gb_01501 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Gb_06127 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| Gb_07424 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Gb_07439 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| LOC_Os01g14660.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| LOC_Os02g16730.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| LOC_Os02g16780.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| LOC_Os02g51040.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| LOC_Os03g21820.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| LOC_Os03g25990.1 | No alias | alpha-class expansin | 0.05 | Archaeplastida | |
| LOC_Os04g15840.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| LOC_Os05g19570.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| LOC_Os06g01920.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| LOC_Os10g30330.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| LOC_Os10g30340.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| LOC_Os10g39110.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| MA_100868g0010 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| MA_10433559g0020 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| MA_130258g0010 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| MA_14588g0010 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| MA_18265g0010 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| MA_30127g0010 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| MA_3618g0010 | No alias | Expansin-A15 OS=Arabidopsis thaliana... | 0.03 | Archaeplastida | |
| MA_36587g0010 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| MA_37884g0010 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| MA_4979g0010 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| MA_651027g0010 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| MA_6644365g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_70880g0010 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| MA_7218g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| MA_86877g0010 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| MA_8784268g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_915221g0010 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Mp1g22700.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Mp1g22740.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Mp1g24230.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Mp2g18600.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Mp2g18610.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Mp3g06900.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Mp3g09650.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Mp3g09770.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Mp3g12280.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Mp3g24470.1 | No alias | alpha-class expansin | 0.02 | Archaeplastida | |
| Mp5g01930.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Mp8g18860.1 | No alias | alpha-class expansin | 0.03 | Archaeplastida | |
| Pp3c12_4560V3.1 | No alias | expansin A9 | 0.02 | Archaeplastida | |
| Pp3c13_20360V3.1 | No alias | expansin A9 | 0.04 | Archaeplastida | |
| Pp3c14_18450V3.1 | No alias | expansin A14 | 0.02 | Archaeplastida | |
| Pp3c18_19660V3.1 | No alias | expansin A9 | 0.02 | Archaeplastida | |
| Pp3c18_19720V3.1 | No alias | expansin A1 | 0.03 | Archaeplastida | |
| Pp3c20_5780V3.1 | No alias | expansin A15 | 0.03 | Archaeplastida | |
| Pp3c22_760V3.1 | No alias | expansin A1 | 0.02 | Archaeplastida | |
| Pp3c24_15400V3.1 | No alias | expansin A15 | 0.02 | Archaeplastida | |
| Smo143857 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| Smo230202 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.04 | Archaeplastida | |
| Smo409954 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| Smo78615 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.03 | Archaeplastida | |
| Smo90332 | No alias | Cell wall.cell wall proteins.expansins.alpha-type expansin | 0.02 | Archaeplastida | |
| Solyc03g115270.3.1 | No alias | alpha-class expansin | 0.07 | Archaeplastida | |
| Solyc08g007780.3.1 | No alias | Putative expansin-A30 OS=Oryza sativa subsp. japonica... | 0.04 | Archaeplastida | |
| Solyc08g080060.4.1 | No alias | alpha-class expansin | 0.05 | Archaeplastida | |
| Solyc09g010860.4.1 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| Zm00001e000429_P001 | No alias | alpha-class expansin | 0.06 | Archaeplastida | |
| Zm00001e004714_P001 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| Zm00001e004719_P001 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| Zm00001e004720_P001 | No alias | alpha-class expansin | 0.05 | Archaeplastida | |
| Zm00001e004721_P001 | No alias | no hits & (original description: none) | 0.04 | Archaeplastida | |
| Zm00001e014231_P001 | No alias | Expansin-A13 OS=Oryza sativa subsp. japonica... | 0.02 | Archaeplastida | |
| Zm00001e014247_P001 | No alias | Expansin-A23 OS=Oryza sativa subsp. japonica... | 0.02 | Archaeplastida | |
| Zm00001e017221_P001 | No alias | alpha-class expansin | 0.05 | Archaeplastida | |
| Zm00001e017334_P001 | No alias | alpha-class expansin | 0.04 | Archaeplastida | |
| Zm00001e041376_P001 | No alias | alpha-class expansin | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | Neighborhood |
| MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004252 | serine-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004650 | polygalacturonase activity | IEP | Neighborhood |
| MF | GO:0004866 | endopeptidase inhibitor activity | IEP | Neighborhood |
| MF | GO:0004869 | cysteine-type endopeptidase inhibitor activity | IEP | Neighborhood |
| MF | GO:0005506 | iron ion binding | IEP | Neighborhood |
| BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
| BP | GO:0006508 | proteolysis | IEP | Neighborhood |
| MF | GO:0008146 | sulfotransferase activity | IEP | Neighborhood |
| MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
| MF | GO:0008236 | serine-type peptidase activity | IEP | Neighborhood |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
| BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | Neighborhood |
| MF | GO:0016782 | transferase activity, transferring sulfur-containing groups | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | Neighborhood |
| MF | GO:0017171 | serine hydrolase activity | IEP | Neighborhood |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
| MF | GO:0020037 | heme binding | IEP | Neighborhood |
| MF | GO:0030414 | peptidase inhibitor activity | IEP | Neighborhood |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
| MF | GO:0061134 | peptidase regulator activity | IEP | Neighborhood |
| MF | GO:0061135 | endopeptidase regulator activity | IEP | Neighborhood |
| MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
| MF | GO:0140110 | transcription regulator activity | IEP | Neighborhood |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
| No external refs found! |