Solyc03g115320.3.1

Description : alpha-class expansin

Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0016604 (LandPlants) Phylogenetic Tree(s): OG_05_0016604_tree ,
OG_06_0016213 (SeedPlants) Phylogenetic Tree(s): OG_06_0016213_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g115320.3.1
Cluster	HCCA: Cluster_24

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00072p00134750	evm_27.TU.AmTr_v1...	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.01	Archaeplastida
AMTR_s00168p00074090	evm_27.TU.AmTr_v1...	No description available	0.01	Archaeplastida
AT5G39280	ATHEXP ALPHA ...	expansin A23	0.02	Archaeplastida
AT5G39300	ATEXPA25,...	expansin A25	0.01	Archaeplastida
GSVIVT01028474001	No alias	Cell wall.cell wall proteins.expansins.alpha-type expansin	0.02	Archaeplastida
Gb_04404	No alias	alpha-class expansin	0.01	Archaeplastida
LOC_Os02g51040.1	No alias	alpha-class expansin	0.02	Archaeplastida
Solyc03g115310.1.1	No alias	alpha-class expansin	0.01	Archaeplastida

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR009009	RlpA-like_DPBB	72	157
IPR007117	Expansin_CBD	169	245

External Links

No external refs found!