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  5. Solyc03g116320.3.1

Solyc03g116320.3.1


Description : transcription factor (TCP)


Gene families : OG0000415 (Archaeplastida) Phylogenetic Tree(s): OG0000415_tree ,
OG_05_0000215 (LandPlants) Phylogenetic Tree(s): OG_05_0000215_tree ,
OG_06_0000299 (SeedPlants) Phylogenetic Tree(s): OG_06_0000299_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g116320.3.1
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AT3G47620 AtTCP14, TCP14 TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.04 Archaeplastida
GSVIVT01008023001 No alias RNA biosynthesis.transcriptional activation.TCP... 0.05 Archaeplastida
LOC_Os12g07480.1 No alias transcription factor (TCP) 0.02 Archaeplastida
MA_635g0010 No alias transcription factor (TCP) 0.03 Archaeplastida
Mp7g09490.1 No alias transcription factor (TCP) 0.01 Archaeplastida
Pp3c10_20400V3.1 No alias TEOSINTE BRANCHED, cycloidea and PCF (TCP) 14 0.02 Archaeplastida
Pp3c3_24660V3.1 No alias TCP family transcription factor 0.01 Archaeplastida
Smo441321 No alias RNA biosynthesis.transcriptional activation.TCP... 0.02 Archaeplastida
Zm00001e015209_P001 No alias transcription factor (TCP). CHE circadian clock repression factor 0.02 Archaeplastida
Zm00001e024509_P001 No alias transcription factor (TCP) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 91 264
No external refs found!