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  5. AMTR_s00024p00175750

AMTR_s00024p00175750 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.133

No description available


Gene families : OG0005641 (Archaeplastida) Phylogenetic Tree(s): OG0005641_tree ,
OG_05_0006514 (LandPlants) Phylogenetic Tree(s): OG_05_0006514_tree ,
OG_06_0006757 (SeedPlants) Phylogenetic Tree(s): OG_06_0006757_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00175750
Cluster HCCA: Cluster_263

Target Alias Description ECC score Gene Family Method Actions
Cre03.g182900 No alias No description available 0.01 Archaeplastida
LOC_Os03g51160.2 No alias no hits & (original description: none) 0.05 Archaeplastida
Pp3c21_11350V3.1 No alias Protein of unknown function DUF106, transmembrane 0.03 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
InterPro domains Description Start Stop
IPR002809 EMC3/TMCO1 10 164
No external refs found!