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  5. AMTR_s00024p00180240

AMTR_s00024p00180240 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.140

Description : Protein MAIN-LIKE 2 OS=Arabidopsis thaliana


Gene families : OG0000428 (Archaeplastida) Phylogenetic Tree(s): OG0000428_tree ,
OG_05_0000219 (LandPlants) Phylogenetic Tree(s): OG_05_0000219_tree ,
OG_06_0000090 (SeedPlants) Phylogenetic Tree(s): OG_06_0000090_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00180240

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00179400 evm_27.TU.AmTr_v1... Protein MAIN-LIKE 2 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00023p00165130 evm_27.TU.AmTr_v1... Protein MAIN-LIKE 2 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00038p00069390 evm_27.TU.AmTr_v1... Protein MAIN-LIKE 2 OS=Arabidopsis thaliana 0.05 Archaeplastida
AMTR_s00044p00183280 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AMTR_s00054p00054050 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00077p00064360 evm_27.TU.AmTr_v1... Protein MAIN-LIKE 2 OS=Arabidopsis thaliana 0.08 Archaeplastida
AMTR_s00108p00146810 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s02997p00006970 evm_27.TU.AmTr_v1... Protein MAIN-LIKE 2 OS=Arabidopsis thaliana 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP Neighborhood
MF GO:0070001 aspartic-type peptidase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR019557 AminoTfrase-like_pln_mobile 16 90
IPR019557 AminoTfrase-like_pln_mobile 105 161
No external refs found!