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  5. AMTR_s00024p00182360

AMTR_s00024p00182360 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00024.145

No description available


Gene families : OG0000612 (Archaeplastida) Phylogenetic Tree(s): OG0000612_tree ,
OG_05_0001252 (LandPlants) Phylogenetic Tree(s): OG_05_0001252_tree ,
OG_06_0000759 (SeedPlants) Phylogenetic Tree(s): OG_06_0000759_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00024p00182360
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00245420 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
AT5G19870 No alias Family of unknown function (DUF716) 0.03 Archaeplastida
GSVIVT01031878001 No alias No description available 0.03 Archaeplastida
GSVIVT01036879001 No alias No description available 0.03 Archaeplastida
Gb_11955 No alias no hits & (original description: none) 0.05 Archaeplastida
Gb_11959 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_41535 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_41536 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g36030.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g27250.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os09g27260.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os11g40570.1 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_10429075g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_10429075g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_135096g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_73440g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8895597g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc01g006050.2.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc10g050430.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e021183_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e030554_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e034291_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e034292_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004474 malate synthase activity IEP Neighborhood
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
CC GO:0005795 Golgi stack IEP Neighborhood
BP GO:0005996 monosaccharide metabolic process IEP Neighborhood
BP GO:0006006 glucose metabolic process IEP Neighborhood
BP GO:0006081 cellular aldehyde metabolic process IEP Neighborhood
BP GO:0006094 gluconeogenesis IEP Neighborhood
BP GO:0006097 glyoxylate cycle IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019318 hexose metabolic process IEP Neighborhood
BP GO:0019319 hexose biosynthetic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
CC GO:0031984 organelle subcompartment IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
BP GO:0046364 monosaccharide biosynthetic process IEP Neighborhood
BP GO:0046487 glyoxylate metabolic process IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
CC GO:0098791 Golgi subcompartment IEP Neighborhood
InterPro domains Description Start Stop
IPR006904 DUF716_TMEM45 119 256
No external refs found!