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  5. Solyc03g117870.3.1

Solyc03g117870.3.1


Description : p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL)


Gene families : OG0000179 (Archaeplastida) Phylogenetic Tree(s): OG0000179_tree ,
OG_05_0001067 (LandPlants) Phylogenetic Tree(s): OG_05_0001067_tree ,
OG_06_0001032 (SeedPlants) Phylogenetic Tree(s): OG_06_0001032_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g117870.3.1
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00213640 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.11 Archaeplastida
AT1G20490 No alias AMP-dependent synthetase and ligase family protein 0.03 Archaeplastida
AT1G20510 OPCL1 OPC-8:0 CoA ligase1 0.03 Archaeplastida
AT1G51680 4CL1, AT4CL1, 4CL.1 4-coumarate:CoA ligase 1 0.06 Archaeplastida
AT1G62940 ACOS5 acyl-CoA synthetase 5 0.02 Archaeplastida
AT5G38120 4CL8 AMP-dependent synthetase and ligase family protein 0.02 Archaeplastida
GSVIVT01024400001 No alias 4-coumarate--CoA ligase 2 OS=Glycine max 0.07 Archaeplastida
Gb_41091 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.06 Archaeplastida
LOC_Os02g08100.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.07 Archaeplastida
LOC_Os02g46970.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.06 Archaeplastida
LOC_Os06g44620.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.06 Archaeplastida
LOC_Os08g34790.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 Archaeplastida
MA_109119g0010 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.03 Archaeplastida
MA_56692g0010 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.05 Archaeplastida
Mp1g27780.1 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp5g01200.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 Archaeplastida
Pp3c18_6360V3.1 No alias 4-coumarate:CoA ligase 3 0.02 Archaeplastida
Pp3c19_13170V3.1 No alias 4-coumarate:CoA ligase 3 0.04 Archaeplastida
Pp3c22_15350V3.1 No alias 4-coumarate:CoA ligase 3 0.05 Archaeplastida
Pp3c26_11730V3.1 No alias AMP-dependent synthetase and ligase family protein 0.04 Archaeplastida
Smo177393 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
Smo177466 No alias 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc06g068650.4.1 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 Archaeplastida
Zm00001e004865_P001 No alias 4-coumarate--CoA ligase-like 1 OS=Oryza sativa subsp.... 0.04 Archaeplastida
Zm00001e013798_P002 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 Archaeplastida
Zm00001e022313_P002 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.04 Archaeplastida
Zm00001e023286_P002 No alias p-coumarate:CoA ligase. 4-coumarate:CoA ligase (4CL) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004664 prephenate dehydratase activity IEP Neighborhood
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006558 L-phenylalanine metabolic process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Neighborhood
BP GO:0009094 L-phenylalanine biosynthetic process IEP Neighborhood
BP GO:0009095 aromatic amino acid family biosynthetic process, prephenate pathway IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Neighborhood
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016835 carbon-oxygen lyase activity IEP Neighborhood
MF GO:0016836 hydro-lyase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
BP GO:1902221 erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process IEP Neighborhood
BP GO:1902223 erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig 37 445
IPR025110 AMP-bd_C 454 529
No external refs found!