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  5. Solyc03g118770.4.1

Solyc03g118770.4.1


Description : transcription factor (WOX)


Gene families : OG0000425 (Archaeplastida) Phylogenetic Tree(s): OG0000425_tree ,
OG_05_0000212 (LandPlants) Phylogenetic Tree(s): OG_05_0000212_tree ,
OG_06_0017018 (SeedPlants) Phylogenetic Tree(s): OG_06_0017018_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g118770.4.1
Cluster HCCA: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00189010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AMTR_s00051p00020930 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
AT2G01500 PFS2, HOS9, WOX6 Homeodomain-like superfamily protein 0.04 Archaeplastida
AT2G17950 WUS, PGA6, WUS1 Homeodomain-like superfamily protein 0.03 Archaeplastida
AT2G28610 WOX3, PRS1, PRS Homeodomain-like superfamily protein 0.04 Archaeplastida
AT2G33880 STIP, HB-3, WOX9 homeobox-3 0.06 Archaeplastida
GSVIVT01008424001 No alias RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
GSVIVT01016360001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
GSVIVT01018787001 No alias RNA biosynthesis.transcriptional activation.HB... 0.04 Archaeplastida
GSVIVT01021144001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
Gb_01484 No alias transcription factor (WOX) 0.03 Archaeplastida
Gb_12294 No alias transcription factor (WOX) 0.03 Archaeplastida
Gb_27283 No alias transcription factor (WOX) 0.03 Archaeplastida
Gb_29958 No alias transcription factor (WOX) 0.02 Archaeplastida
LOC_Os04g55590.1 No alias transcription factor (WOX) 0.03 Archaeplastida
LOC_Os05g02730.1 No alias transcription factor (WOX) 0.02 Archaeplastida
LOC_Os05g48990.1 No alias transcription factor (WOX) 0.04 Archaeplastida
LOC_Os11g01130.2 No alias transcription factor (WOX) 0.03 Archaeplastida
MA_10344604g0010 No alias transcription factor (WOX) 0.02 Archaeplastida
MA_747816g0010 No alias transcription factor (WOX) 0.02 Archaeplastida
MA_8832398g0010 No alias transcription factor (WOX) 0.02 Archaeplastida
Solyc06g072890.3.1 No alias transcription factor (WOX) 0.04 Archaeplastida
Zm00001e009121_P001 No alias transcription factor (WOX) 0.03 Archaeplastida
Zm00001e024169_P001 No alias transcription factor (WOX) 0.05 Archaeplastida
Zm00001e032433_P003 No alias transcription factor (WOX) 0.02 Archaeplastida
Zm00001e041785_P001 No alias transcription factor (WOX) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 76 135
No external refs found!