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  5. Solyc03g119190.3.1

Solyc03g119190.3.1


Description : ER-associated protein (Reticulon)


Gene families : OG0000225 (Archaeplastida) Phylogenetic Tree(s): OG0000225_tree ,
OG_05_0000137 (LandPlants) Phylogenetic Tree(s): OG_05_0000137_tree ,
OG_06_0000298 (SeedPlants) Phylogenetic Tree(s): OG_06_0000298_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g119190.3.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00221140 evm_27.TU.AmTr_v1... Reticulon-like protein B9 OS=Arabidopsis thaliana 0.1 Archaeplastida
AT1G68230 No alias Reticulon family protein 0.24 Archaeplastida
AT3G18260 No alias Reticulon family protein 0.25 Archaeplastida
AT4G01230 No alias Reticulon family protein 0.02 Archaeplastida
AT4G23630 BTI1, RTNLB1 VIRB2-interacting protein 1 0.03 Archaeplastida
GSVIVT01008336001 No alias Reticulon-like protein B9 OS=Arabidopsis thaliana 0.25 Archaeplastida
GSVIVT01011845001 No alias Reticulon-like protein B9 OS=Arabidopsis thaliana 0.25 Archaeplastida
GSVIVT01015864001 No alias No description available 0.03 Archaeplastida
LOC_Os01g04640.1 No alias ER-associated protein (Reticulon) 0.07 Archaeplastida
LOC_Os01g49660.1 No alias ER-associated protein (Reticulon) 0.06 Archaeplastida
LOC_Os01g63240.1 No alias ER-associated protein (Reticulon) 0.03 Archaeplastida
LOC_Os05g24770.1 No alias ER-associated protein (Reticulon) 0.03 Archaeplastida
MA_10432084g0010 No alias ER-associated protein (Reticulon) 0.03 Archaeplastida
MA_654072g0010 No alias ER-associated protein (Reticulon) 0.13 Archaeplastida
Zm00001e014238_P002 No alias ER-associated protein (Reticulon) 0.06 Archaeplastida
Zm00001e028102_P001 No alias ER-associated protein (Reticulon) 0.05 Archaeplastida
Zm00001e032328_P001 No alias ER-associated protein (Reticulon) 0.16 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003388 Reticulon 34 189
No external refs found!