Solyc03g119290.3.1

Description : EXO9-SUPERKILLER interaction factor (SKI7). GTPase component HBS1/SPL33 of DOM34-HBS1 aberrant mRNA detection complex

Gene families : OG0000191 (Archaeplastida) Phylogenetic Tree(s): OG0000191_tree ,
OG_05_0003968 (LandPlants) Phylogenetic Tree(s): OG_05_0003968_tree ,
OG_06_0003764 (SeedPlants) Phylogenetic Tree(s): OG_06_0003764_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g119290.3.1
Cluster	HCCA: Cluster_173

Target	Alias	Description	ECC score	Gene Family Method
Cre13.g565750	No alias	Elongation factor 1-alpha OS=Vicia faba	0.02	Archaeplastida
LOC_Os01g02720.2	No alias	EXO9-SUPERKILLER interaction factor (SKI7). GTPase...	0.03	Archaeplastida
LOC_Os04g58140.1	No alias	EXO9-SUPERKILLER interaction factor (SKI7). GTPase...	0.03	Archaeplastida
MA_10430514g0010	No alias	No annotation	0.02	Archaeplastida
Pp3c5_28870V3.1	No alias	Translation elongation factor EF1A/initiation factor...	0.02	Archaeplastida
Smo230720	No alias	Elongation factor 1-alpha OS=Oryza sativa subsp. japonica	0.04	Archaeplastida
Zm00001e006530_P003	No alias	EXO9-SUPERKILLER interaction factor (SKI7). GTPase...	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	Neighborhood
MF	GO:0003676	nucleic acid binding	IEP	Neighborhood
MF	GO:0003723	RNA binding	IEP	Neighborhood
MF	GO:0004386	helicase activity	IEP	Neighborhood
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Neighborhood
MF	GO:0004652	polynucleotide adenylyltransferase activity	IEP	Neighborhood
BP	GO:0009451	RNA modification	IEP	Neighborhood
MF	GO:0009982	pseudouridine synthase activity	IEP	Neighborhood
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	Neighborhood
MF	GO:0016866	intramolecular transferase activity	IEP	Neighborhood
BP	GO:0043631	RNA polyadenylation	IEP	Neighborhood
MF	GO:0070566	adenylyltransferase activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004160	Transl_elong_EFTu/EF1A_C	479	583
IPR000795	TF_GTP-bd_dom	160	376

External Links

No external refs found!